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RGLab / openCyto

A package that provides data analysis pipeline for flow cytometry.
GNU Affero General Public License v3.0
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boolGates not appearing as nodes in plot(gs) gating tree #206

Closed alexheubeck closed 4 years ago

alexheubeck commented 4 years ago

My gating template uses a few not boolGates (!gate) that are parents to other downstream gates. When I use getNodes(gs), they show up appropriately. However, when I plot the gating tree using plot(gs), those not boolGates do not show up, and the child gates are added at the top next to the root node. Is there a way to have these boolGates show up in the gating tree plot?

Example: All of the gates on starting on the left come off of a !gate Rplot

jacobpwagner commented 4 years ago

Have you already checked out the boolean=TRUE arg to plot? It's FALSE by default.

alexheubeck commented 4 years ago

Must have missed that, that fixed my problem. Thanks!