Post-update input detection is not consistent

RIVM-bioinformatics / ViroConstrictor

ViroConstrictor is a pipeline designed to process raw FastQ data from viral amplicon-based sequencing and generate biologically correct consensus sequences of the given viral genome

https://rivm-bioinformatics.github.io/ViroConstrictor/

GNU Affero General Public License v3.0

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Post-update input detection is not consistent #111

Open florianzwagemaker opened 1 month ago

florianzwagemaker commented 1 month ago

It seems that input and/or output directories are not always properly detected as a directory in a post-update scenario. (only when self-updating)