search

RMichaelPickering / penn-orchestra

Automatically exported from code.google.com/p/penn-orchestra
0 stars 0 forks source link

IllegalStateException occuring in ProvenanceGraph #11

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago 
ProvenanceGraph.exploreNeighbors(...) is catching an IllegalStateException
thrown by edu.upenn.cis.orchestra.datamodel.Relation.getRelationID(...) and
printing it to stderr.

I have seen this happen with the bioSimpleZ.schema when viewing the 
provenance
graphs of tuples from PCBI.PLASMODB.GOTERM_SUMMARY which have more than one
derivation.

Original issue reported on code.google.com by jwfro...@gmail.com on 24 May 2010 at 3:29

Attachments:

GoogleCodeExporter commented 8 years ago 
ProvenanceGraph was creating Relations without setting a Schema.

The fix was to set Schemas for these Relations, and also to have 
Relation.getRelationName() skip the lookup by relationID for Relations with 
relationID 
= NO_ID.

Original comment by jwfro...@gmail.com on 26 May 2010 at 7:35