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RNAcentral / rnacentral-webcode

RNAcentral website source code
https://rnacentral.org
Apache License 2.0
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RNAcentral - Open Targets integration #136

Open AntonPetrov opened 7 years ago

AntonPetrov commented 7 years ago

For Open Targets, RNAcentral could provide bibliography, entry descriptions, cross-references, and, in future, secondary structure visualisations (currently Open Targets only looks for this kind of information in UniProt).

In RNAcentral, we could show if an RNA is associated with diseases. For example, NKILA lncRNA is associated with 10 diseases: http://www.targetvalidation.org/target/ENSG00000278709

Another idea is to use TarBase miRNA-protein associations to suggest miRNAs as targets.

AntonPetrov commented 4 years ago

Another example page: https://alpha.targetvalidation.org/target/ENSG00000284440

Note the genome browser track with variants linked to diseases.