Macro Access to become more integrated

[mbolt01]

Proposal to integrate the macros more closely into Image J.

• Run IJ from a network location to ensure consistent version.
• Include macros in the IJ menus to simplify access to current macros.
• Include new macros in GitHub.
  • Startup macro should also be included on GitHub to ensure it can be reproduced if required?

JP to get this up and running. Development can happen alongside current procedures.

[mbolt01]

Note that macro names must have an underscore in them to show up in the menu. The Asymmetric macro should be renamed to Asymmetric_Analysis or similar.

Also note that the macros seem to show up under the plugins menu if they exist within the plugins folder. So the toolset does not technically have to be loaded to use the macros. This means simpler maintenance in the future. Redundant plugins could be removed form the folder to keep a clean menu?

[mbolt01]

Should we change to using the '.ijm' file extension rather than the current '.txt'? IJM files would be slightly more difficult to edit accidentally, and are more future proof (IJ2 does not support .txt files)

[mbolt01]

Restructure directory:

• Linac
  • Rad-Light
    • Gafchromic
      • macro 1
      • macro 2
      • macro 3
    • EPID
      • macro 1
      • macro 2
      • macro 3
  • MV Analysis
    • macros...
• Gulmay
• Papillon

[mbolt01]

ImageJ integration completed with pull request #26