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RTXteam / RTX-KG2

Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
MIT License
38 stars 8 forks source link

test out upload of KG2.7.3c to the Translator Knowledge Graph Exchange (KGE) #153

Closed saramsey closed 3 years ago

saramsey commented 3 years ago

Contact person for KGE questions is Richard Bruskiewich (SRI Team).

saramsey commented 3 years ago

Richard suggests that we test uploading KG2.7.3c to their test KGE instance. The URL for that KGE instance is: https://kge-data-staging.starinformatics.ca/

RichardBruskiewich commented 3 years ago

Hi all, @saramsey if anyone else on your team needs an account to assist with the uploading, let me know. Alternately, you can give them your credentials for the upload. Lest this sound secure, this will put your name on the upload and besides, I'm going to be resetting the user account database soon for the Translator production server, so you'll get a new account there anyhow.

saramsey commented 3 years ago

see https://github.com/RTXteam/RTX/blob/master/code/kg2c/kg2c_tsv_to_kgx_tsv.py

saramsey commented 3 years ago

Done (marked as fileset KG2c and version "7.3")

Screen Shot 2021-09-24 at 7 45 24 PM
saramsey commented 3 years ago

Now we need to do KG2. Will do this next week at the relay.

saramsey commented 3 years ago

OK, @acevedol is working on the KGX-TSV export of KG2, as a first step toward uploading KG2 to KGE.

saramsey commented 3 years ago

Upload of KG2.7.3c to KGE was successful.