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RTXteam / RTX-KG2

Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
MIT License
38 stars 8 forks source link

KGX Build Error #288

Open ecwood opened 1 year ago

ecwood commented 1 year ago

image

acevedol commented 1 year ago 
Traceback (most recent call last):
  File "/home/ubuntu/kg2-code/kg2_json_to_kgx_tsv.py", line 128, in <module>
    for item in nodes_data:
  File "/home/ubuntu/kg2-code/kg2_json_to_kgx_tsv.py", line 110, in <genexpr>
    nodes_data = (row for row in ijson.items(input_file, "nodes.item"))
ijson.common.IncompleteJSONError: parse error: premature EOF