RTXteam / RTX-KG2

Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
MIT License
39 stars 8 forks source link

Update UMLS to UMLS2023AA #292

Closed ecwood closed 1 year ago

ecwood commented 1 year ago

Since UMLS's extract script has to be reworked anyways per #291 and #232 (which featured a bad download of 2022AA and some hacky fixes with 73f503c), I think it is time to upgrade to 2023AA. (That way, the energy we could spend patching for an old version can be directed at a more updated version.)

ecwood commented 1 year ago

As of KG2.8.4pre, this issue is complete:

match (n) where n.category="biolink:RetrievalSource" and n.name contains "UMLS" return n

image