search

RTXteam / RTX-KG2

Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
MIT License
39 stars 8 forks source link

Source Predicates Missing From YAML Config File #330

Closed ecwood closed 1 year ago

ecwood commented 1 year ago

While working on #312 (KG2.8.4), the build failed due to missing source predicates:

Source predicate curie is missing from the YAML config file: RO:0002596
Source predicate curie is missing from the YAML config file: RO:0002570
Source predicate curie is missing from the YAML config file: CL:4030045
Source predicate curie is missing from the YAML config file: NCIT:has_dipg_dmg_permissible_value
Source predicate curie is missing from the YAML config file: OBO:HANCESTRO_0330
Source predicate curie is missing from the YAML config file: NCIT:is_pcdc_hl_permissible_value_for_variable
Source predicate curie is missing from the YAML config file: CL:4030044
Source predicate curie is missing from the YAML config file: NCIT:has_pcdc_hl_permissible_value
Source predicate curie is missing from the YAML config file: NCIT:is_dipg_dmg_permissible_value_for_variable
Source predicate curie is missing from the YAML config file: CL:4030046
Source predicate curie is missing from the YAML config file: NCIT:is_pcdc_os_permissible_value_for_variable
Source predicate curie is missing from the YAML config file: OBO:HANCESTRO_0308
Source predicate curie is missing from the YAML config file: OBO:HANCESTRO_0301
Source predicate curie is missing from the YAML config file: DRUGBANK:carrier
Source predicate curie is missing from the YAML config file: NCIT:has_pcdc_os_permissible_value
Source predicate curie is missing from the YAML config file: RO:0002336
There are source predicate curies missing from the yaml config file. Please add them and try again. Exiting.
ecwood commented 1 year ago

Since the KG2.8.4pre build finished successfully, I am going to close this issue as completed.