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RTXteam / RTX

Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
https://arax.ncats.io/
MIT License
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Filtering out any results that depend on biolink:applied_to_treat #2320

Closed sundareswarpullela closed 2 months ago

sundareswarpullela commented 2 months ago

This is a short term workaround to filter out result edges coming from infores:chembl that depend on biolink:applied_to_treat until the edges are removed in the KG2.10.1pre build stage.

amykglen commented 2 months ago

to clarify, I think this applies only to edges coming from infores:chembl

amykglen commented 2 months ago

I just pushed a patch for this in the kg2.10.0c branch because I was in the code and will be starting that build soon - but if @sundareswarpullela or @saramsey think that this patch should be added elsewhere, I can easily remove the two lines of code

sundareswarpullela commented 2 months ago

Awesome @amykglen , this will avoid infores:chembl edges that depend on biolink:applied_to_treat in the KG2.10.0c build itself.

amykglen commented 2 months ago

confirmed that no biolink:applied_to_treat edges from infores:chembl exist in KG2.10.0c, as desired. closing