Fixing CICD database auto download issue

RTXteam / RTX

Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

https://arax.ncats.io/

MIT License

33 stars 21 forks source link

Open sundareswarpullela opened 1 month ago

sundareswarpullela commented 1 month ago

So far we needed to auto download databases into the CICD instance cicd.rtx.ai for every KG2c rollout, or if we added new databases.

Modifying the pytest.yaml file to run the database manager automatically to check and download any new databases are needed.

sundareswarpullela commented 1 week ago

Seems to be running well.

amykglen commented 6 days ago

hey @sundareswarpullela - it looks like cicd.rtx.ai failed to automatically download the KG2.10.1 databases today when we merged kg2.10.1c to master: https://github.com/RTXteam/RTX/actions/runs/11296801621/job/31422385025

sundareswarpullela commented 6 days ago

Hey yes I noticed. I think its an issue with file permissions. Will take a look and rerun the job