RVanDamme / MUFFIN

hybrid assembly and differential binning workflow for metagenomics, transcriptomics and pathway analysis
https://rvandamme.github.io/MUFFIN_Documentation/#introduction
GNU General Public License v3.0
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Report "unused reads" back to the user #17

Closed replikation closed 4 months ago

replikation commented 3 years ago
nanopore reads:  500,000 reads used from 2,000,000
Illumina reads:  2500,000 reads used from 3,000,000

can be provided as a file in the "unused reads dir" or as a final terminal print

microbemarsh commented 1 year ago

I think it would also be useful to report the .gfa files from the assemblers to view the MAGs with Bandage