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RVanDamme / MUFFIN

hybrid assembly and differential binning workflow for metagenomics, transcriptomics and pathway analysis
https://rvandamme.github.io/MUFFIN_Documentation/#introduction
GNU General Public License v3.0
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Due to Spades bug #863, conda.config does not work for MUFFIN #26

Closed marade closed 1 month ago

marade commented 2 years ago

https://github.com/ablab/spades/issues/863

Until Spades 3.15.4 is released, it works properly with these changes:

withLabel : spades { conda = 'bioconda::spades=3.15.3'} withLabel : python38 { conda = 'python=3.9 '}

RVanDamme commented 2 years ago

Hello,

Thanks for reporting this I will fix this and update as soon as Spades 3,15,4 is released