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RVanDamme / MUFFIN

hybrid assembly and differential binning workflow for metagenomics, transcriptomics and pathway analysis
https://rvandamme.github.io/MUFFIN_Documentation/#introduction
GNU General Public License v3.0
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`eggnog_download_db'` failed because `download_eggnog_data.py` not found #8

Closed RemiMaglione closed 4 years ago

RemiMaglione commented 4 years ago

Hello, eggnog_download_db' failed because download_eggnog_data.py not found. I don't know if it's an issue from my side but I download and install it on the metwarp-env with: conda install -c bioconda eggnog-mapper Since I'm kind of new in the conda env dynamics,even if the eggnog install went well, the download_eggnog_data.py are now on my env path, but the main.nf keep failing at that step. I had to manually download the eggnog db by running: nextflow run /path/to/my/MAFIN/modules/eggnog_get_databases.nf [Which worked, proving that download_eggnog_data.py are accessible for this module but now for the main.nf (???)] Thanks for your help

Originally posted by @RemiMaglione in https://github.com/RVanDamme/MUFFIN/issues/7#issuecomment-613577091

RVanDamme commented 4 years ago

Hello @RemiMaglione, The version 1.0.0 of MUFFIN just got released. This should solve most of the issue you faced while trying the pre-release. If you face issue identical to the one reported here or new issue please feel free to open new issues and report them to us. I will close this issue for now.