search

RabadanLab / arcasHLA

Fast and accurate in silico inference of HLA genotypes from RNA-seq
GNU General Public License v3.0
117 stars 50 forks source link

Create a new release? #50

Closed holtgrewe closed 3 years ago

holtgrewe commented 3 years ago

Hi, could you create a new release? I'm creating a bioconda package right now and it would be nice to have the latest and greatest version up there...

holtgrewe commented 3 years ago

FWIW the package for 0.2.0 is here: http://bioconda.github.io/recipes/arcas-hla/README.html

IoanFilip2 commented 3 years ago

That's great, thank you so much for creating the bioconda package! We are grateful for your contribution. The version you have included in this package is essentially up to date.

Please note that we are currently developing a new functionality, arcasHLA-quant, to quantify allele-specific expression. Provisionally, we have released this functionality here. After going through peer review, we will officially include these scripts within the arcasHLA repository. At that point, an update should be released for bioconda. Thanks again!

eegk commented 3 years ago

Dear author, the dropbox reference link is not longer functional. :'( Thanks.

IoanFilip2 commented 3 years ago

The dropbox reference is no longer needed: arcasHLA-quant/dat/ref/ contains all the required files to run.