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RabadanLab / arcasHLA

Fast and accurate in silico inference of HLA genotypes from RNA-seq
GNU General Public License v3.0
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Can we add new population? #99

Open yyoshiaki opened 1 year ago

yyoshiaki commented 1 year ago

Hi!

Thank you for developing such a wonderful tool! We are using arcasHLA for the extraction of HLA reads and typing alleles. I'm interested in adding a new population, especially the Japanese population rather than asian_pacific_islander the prior allele frequency to increase the accuracy at maximum. Do you have any instructions for adding a new population?

Best, Yoshi

yyoshiaki commented 1 year ago

Are Adding a column in hla_freq.tsv and the population in parameters.json enough?