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RafaPe
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MetaTaxonomyPlot
Script to generate taxonomy plot from metagenomic samples
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Species level plot
#1
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RafaPe
opened
9 months ago
RafaPe
commented
9 months ago
Problem generating relative abundance plots for species level
nselem
commented
6 months ago
[ ] graph similar to
Fig 5 Vayes Colomer
columns= samples, rows=species, circle size=completness, color= contamination
nselem
commented
2 weeks ago
[x] Identificar las rutas funcionales de Vayes colomer relacionadas a neurologia GBM 56 rutas
[ ] logfold change de BINs
[ ] Diversidad alfa faith
[x] Reducir categorias infantes niños
[x] Tabla de abundancia de OTUs que tienen MAGs
[x] Hacer grafica beta diversidad coloreando por familias de preferencia unidos por flechas
[x] antiSMASH
[ ] Comparar beta y alfa vs camda
Problem generating relative abundance plots for species level