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RahmanTeam / DECoN

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Update dependency for ExomeDepth- Fixes #41 #42

Open bpow opened 1 year ago

bpow commented 1 year ago

I believe this should fix #41, at the very least it allows for installation. If the subsequent changes to exomedepth are not compatible with something DECoN does then there may be other issues.

user-tq commented 1 year ago

I believe this should fix #41, at the very least it allows for installation. If the subsequent changes to exomedepth are not compatible with something DECoN does then there may be other issues. Thank you. This method works, but I seem to have other problems. by run 

git clone https://github.com/bpow/DECoN.git  -b exomedepth-1.1.16
cd DECoN/Linux/
sh setup.sh

I think I installed successfully. However, I can only run successfully when I am in the directory DECoN/Linux/ . Once I switch directories,

Error in loadNamespace(x) :  There is no package named 'renv'
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart