ricardovialle
commented
3 years ago - Allow differences between sampleKey and covariates files by using the intersection of samples downstream.
- Allow subsetting genes (from GTF file) in the splicing analysis and to work with a variable number of chromosomes as input.
- Concat was failing for some files. Added a sorting step to fix (it's slow)
- Update example data.
- Update cluster config (scaled up to ~1000 donors). Still failing to run for (2.8k donor).