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RajLabMSSM / echolocatoR

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
https://rajlabmssm.github.io/echolocatoR
MIT License
34 stars 11 forks source link

echolocatoR singularity container #10

Closed bschilder closed 1 year ago

bschilder commented 3 years ago

Create a singularity container for echolocatoR to minimize installation issues.

drkrynstrng commented 3 years ago

Has anyone created a Singularity container image that could be distributed? It would definitely ease installation issues, especially on HPC clusters.

bschilder commented 3 years ago

Hi @drkrynstrng , thanks for the interest in echolocatoR! I haven't quite had a chance to make the singularity container just yet but this is definitely on my list and I'll be sure to let you know as soon as it's ready for release.

In the meantime, thanks for your patience and let me know if there's anything else I can help with!

bschilder commented 1 year ago

@drkrynstrng the official echolocatoR Docker/Singularity container is finally available! Sorry for the long wait, but there should be regular updates to it now that I have built into my GitHub Actions workflow.

See here for installation/usage instructions: https://rajlabmssm.github.io/echolocatoR/articles/docker