RajLabMSSM / echolocatoR

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
https://rajlabmssm.github.io/echolocatoR
MIT License
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Functionnal fine-mapping #136

Open ZoeGerber opened 1 year ago

ZoeGerber commented 1 year ago

Hi,

I would like to perform functionnal fine mapping analysis on a Coronary Artery Disease (CAD) dataset (GWAS file available here : https://data.mendeley.com/datasets/gbbsrpx6bs/1), and specificaly using PAINTOR. Can I use your pipeline from this data ? The procedure to intergrate annotations is not clear. Can you give me some clues about the command line to use?

Thanks for yor help