bin/bedtofasta.pl and bin/generate_random_background.pl have comments before the hash-bang line, rendering it non-functional.
pipeline_trawler_02_phastcons.pl (and bin/bedtofasta.pl on top of the above issue) have #! usr/bin/perl -- there is a space instead of a slash, rendering this non-functional.
Also, it would arguably be better to use this rather than assuming /usr/bin/perl is the appropriate installation of Perl to be using:
The following lists the first line of all the Perl scripts under
bin/
at the command line:Problems:
bin/bedtofasta.pl
andbin/generate_random_background.pl
have comments before the hash-bang line, rendering it non-functional.pipeline_trawler_02_phastcons.pl
(andbin/bedtofasta.pl
on top of the above issue) have#! usr/bin/perl
-- there is a space instead of a slash, rendering this non-functional.Also, it would arguably be better to use this rather than assuming
/usr/bin/perl
is the appropriate installation of Perl to be using: