R CMD check code/documentation mismatches

[arcolombo]

here is a warning issues by code/documentation mismatches.

• checking for code/documentation mismatches ... WARNING Loading required package: rtracklayer Loading required package: knitr Loading required package: stringdist Loading required package: biomaRt Warning: replacing previous import ‘Biostrings::tail’ by ‘utils::tail’ when loading ‘TxDbLite’ Warning: replacing previous import ‘Biostrings::head’ by ‘utils::head’ when loading ‘TxDbLite’ Loading required package: SummarizedExperiment Loading required package: Rsamtools Loading required package: XVector Loading required package: Biostrings Loading required package: beeswarm Loading required package: tools Loading required package: ComplexHeatmap Loading required package: grid

Attaching package: ‘ComplexHeatmap’

The following object is masked from ‘package:biomaRt’:

select

The following object is masked from ‘package:AnnotationDbi’:

select

Attaching package: ‘arkas’

The following object is masked from ‘package:GenomicFeatures’:

features

Loading required package: rtracklayer Loading required package: knitr Loading required package: stringdist Loading required package: biomaRt Warning: replacing previous import ‘Biostrings::tail’ by ‘utils::tail’ when loading ‘TxDbLite’ Warning: replacing previous import ‘Biostrings::head’ by ‘utils::head’ when loading ‘TxDbLite’ Loading required package: SummarizedExperiment Loading required package: Rsamtools Loading required package: XVector Loading required package: Biostrings Loading required package: beeswarm Loading required package: tools

Loading required package: ComplexHeatmap Loading required package: grid

Attaching package: ‘ComplexHeatmap’

The following object is masked from ‘package:biomaRt’:

select

The following object is masked from ‘package:AnnotationDbi’:

select

Attaching package: ‘arkas’

The following object is masked from ‘package:GenomicFeatures’:

features

Loading required package: rtracklayer Loading required package: knitr Loading required package: stringdist Loading required package: biomaRt Warning: replacing previous import ‘Biostrings::tail’ by ‘utils::tail’ when loading ‘TxDbLite’ Warning: replacing previous import ‘Biostrings::head’ by ‘utils::head’ when loading ‘TxDbLite’ Loading required package: SummarizedExperiment Loading required package: Rsamtools Loading required package: XVector Loading required package: Biostrings Loading required package: beeswarm Loading required package: tools Loading required package: ComplexHeatmap Loading required package: grid

Attaching package: ‘ComplexHeatmap’

The following object is masked from ‘package:biomaRt’:

select

The following object is masked from ‘package:AnnotationDbi’:

select

Attaching package: ‘arkas’

The following object is masked from ‘package:GenomicFeatures’:

features