Write down a simple sample (2-3 populations with a few individuals each) and calculate the Fst by hand using the reference papers.
Write this number as a constant and assert that Fst calculation matches this number.
Do this for the global Fst (both classic and corrected formulas), pairwise Fst, and per-locus Fst.
TheoPannetier
commented
2 days ago
Write down a simple sample (2-3 populations with a few individuals each) and calculate the Fst by hand using the reference papers. Write this number as a constant and assert that Fst calculation matches this number.
Do this for the global Fst (both classic and corrected formulas), pairwise Fst, and per-locus Fst.