Rappsilber-Laboratory / AlphaLink2

AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
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EOFError: Ran out of Input (Colaboratory) #12

Closed ciancone94 closed 8 months ago

ciancone94 commented 8 months ago

Hello,

I have used AL2 on Colaboratory previously with success; however, I have run into a strange error when running the prediction now. Here is a screenshot:

Screenshot 2023-10-09 at 10 27 24 AM

I am using all of the default arguments and making sure the cells are fully loaded in order each time, as I have previously. Any idea why this is happening? I tried with a few different fastas and XL.csv files and I'm getting the same issue each time.

Thanks,

Anthony

Update Oct 13: I simply tried the same inputs again and everything worked. Andrea suggested it may have been a GPU assignment issue on the back-end. Either way, I can't reproduce this error anymore.