lutzfischer
commented
9 months ago - new sub-score precursor observed in MS2
- new watchdog that warns if to much time is spend in garbage collection -> not enough memory
- modification to MS2PD to optionally inculde charge state
- template system for configuration with 4 templates provided (2 for BS3/DSS and 2 for DSSO)
- xiSEARCH GUI has memory setting
- xiSEARCH GUI moved non-covalent from crosslinker to new checkbox
- mzIdentML owner info directly editable in the xiSEARCH GUI
- for each search a log-file is generated
- number format locale correctly forwarded to xiFDR
- output of annotated peaks can be enabled in the GUI
- when stubs where configured as par of an asymmetric crosslinker defintion, these where ignored
- protein name and description are reported (if parsable from the fasta-file)
- scan number are now reported without a 1000 digit separator (e.g 1345 instead of 1,345)
- file names get quoted to prevent troubles with commas in file names
- Customisable Search Templates
- Search runs in separate process
- Memory for search definable in GUI
- regularly check how much time is spend in Garbage collection and warn if that gets to large as this indicates that not enough memory is available
- BugFix: csv-output did not quote file names correctly - meaning commas in filenames can mess up the columns