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RasmussenLab / phamb

Downstream processing of VAMB binning for Viral Elucidation
MIT License
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contig length #45

Closed Dorothydu12 closed 1 year ago

Dorothydu12 commented 1 year ago

Hi,

If I use contig with more than 1000 lengths, the only I need to do is change the parameter in RF.py and RF_modules.py, right?

Thanks!

joacjo commented 1 year ago

Hi Dorothy I assume that you also ran VAMB including contigs with >1000 bp in length? In that case, yes you can simply change the contig filtering parameter in the RF-scripts.

Best, Joachim