A file to map the bins and samples

[WeimingWHu]

I understand the change of the sample names, but is there a file summarize which bins are in which sample, and also map back to original sampleID? Such as if the "quality_report.csv" file, it also include the original sampleID, and also the taxa information from checkm2, that would be awesome!

[jakobnissen]

The output of VAE (i.e. vae_clusters.tsv) contains a map from the bin to the contig names. From the contig name, you should be able to figure out what sample it came from, since you (presumably?) made the contig catalogue yourself.