install error

[rmontagn]

Hello,

I have an error message when trying to install cellID.

My command is

install.packages("devtools")
library(devtools)
setRepositories(ind = c(1,2,3))
devtools::install_github("RausellLab/CelliD")

✓  checking for file ‘/tmp/Rtmpp849JS/remotes11b7e22ddda00/RausellLab-CelliD-a19c2b2/DESCRIPTION’ (458ms)
─  preparing ‘CelliD’:
✓  checking DESCRIPTION meta-information ...
─  cleaning src
─  installing the package to process help pages
         -----------------------------------
   ERREUR : cette version de R est 4.0.3, le package 'CelliD' nécessite R  >= 4.1
         -----------------------------------
   ERROR: package installation failed
Erreur : Failed to install 'CelliD' from GitHub:
  System command 'R' failed, exit status: 1, stdout + stderr:
E> * checking for file ‘/tmp/Rtmpp849JS/remotes11b7e22ddda00/RausellLab-CelliD-a19c2b2/DESCRIPTION’ ... OK
E> * preparing ‘CelliD’:
E> * checking DESCRIPTION meta-information ... OK
E> * cleaning src
E> * installing the package to process help pages
E>       -----------------------------------
E> ERREUR : cette version de R est 4.0.3, le package 'CelliD' nécessite R  >= 4.1
E>       -----------------------------------
E> ERROR: package installation failed

I thought that version >= 4.0 was enough (I am not sure that R4.1 exists). Do you know what the problem could be ?

Thank you

[Cortalak]

Hi sorry for the late reply and thank you very much for your feedback.

We're currently migrating the package to bioconductor, and I forgot that we were using the development version of R to comply with bioconductor policies (ver 4.1).

The bioconductor packag should be normally available in a month. Meanwhile I pushed a new branch called legacy that should be compatible with everything higher than 3.6. It should be possible to install from github by specifying the branch.

devtools::install_github("RausellLab/CelliD", ref = "legacy")

Best regards

Akira