ReactionMechanismGenerator / RMG-Py

Python version of the amazing Reaction Mechanism Generator (RMG).
http://reactionmechanismgenerator.github.io/RMG-Py/
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Error message when generating mechanism #2665

Closed DiegoGuajardoP closed 6 months ago

DiegoGuajardoP commented 6 months ago

Topic

General area which your question is related to.

Context

Hi everyone,

I just installed the developers version of RMG for Linux and when running the superminimal example to see if everything is right I got the following error message:

"warning: unknown data in line table prologue at offset 0x0000d950: parsing ended (at offset 0x0000db7d) before reaching the prologue end at offset 0x0000e0da
warning: unknown data in line table prologue at offset 0x0000ca57: parsing ended (at offset 0x0000cc84) before reaching the prologue end at offset 0x0000d1c6
┌ Warning: Error requiring `Enzyme` from `LinearSolve`
│   exception =
│    LoadError: ArgumentError: Package LinearSolve does not have Enzyme in its dependencies:
│    - You may have a partially installed environment. Try `Pkg.instantiate()`
│      to ensure all packages in the environment are installed.
│    - Or, if you have LinearSolve checked out for development and have
│      added Enzyme as a dependency but haven't updated your primary
│      environment's manifest file, try `Pkg.resolve()`.
│    - Otherwise you may need to report an issue with LinearSolve"

Question

The mechanism was generated but I am just wondering what i missed during the installation.

Installation Information

Installation by Source Using Anaconda Environment for Linux

JacksonBurns commented 6 months ago

Hi @DiegoGuajardoP this is just a warning from one of our upstream dependencies. Re-doing the installation process (or at least the RMS part) may fix this in the future.

For now, since this is just a warning and the mechanism was still generated, you can safely ignore this issue!