ReactionMechanismGenerator / RMG-website

A Django-powered website for Reaction Mechanism Generator (RMG)
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Update `chemprop_solvation` with a newer version >=0.0.3 to fix a bug with SoluteML #230

Closed yunsiechung closed 3 years ago

yunsiechung commented 3 years ago

One of the packages (chemprop_solvation) has a bug and needs to be updated in order for the SoluteML solvation tool to work properly on RMG-website. This PR will fix it.

Please run: conda env update -f environment.yml pip install git+https://github.com/bp-kelley/descriptastorus

Then the Solute parameter search tool on https://rmg.mit.edu/database/solvation/soluteSearch/ with Machine Learning Prediction (SoluteML) as an estimation method will work. Test this by entering the following input: [H][H] C(CBr)O c1ccccc1 C(C)(=O)O C1=CC=CC2=CC=CC=C12 lllllll Mg Choose Machine Learning Prediction (SoluteML) as an estimation method and water as a solvent. You should get a table showing results below:

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