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ncWMS - A Web Map Service for displaying environmental data over the web
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Map wont update upon changing Time nor Elevation on Suntans dataset #86

Open john-jinghai-ma opened 2 years ago

john-jinghai-ma commented 2 years ago

When test version 2.5.0 and 2.5.1 prebuilt war files, using docker image tag tomcat:9-jdk11, the following log lines are observed in tomcat catalina.out. Functions are not affected in ncWMS web UI with one of our dataset (WRF), but with another dataset (Suntans) the rendered map wont update upon changing Time nor Elevation. The latter exact dataset is tested fine with ncWMS 2.4.0 in java8/tomcat8.

2021-11-11 17:19:39 ERROR DataCatalogue:495 - Problem adding features to cache
java.lang.reflect.InaccessibleObjectException: Unable to make field private final java.lang.Object jdk.internal.loader.AbstractClassLoaderValue$Sub.key accessible: module java.base does not "opens jdk.internal.loader" to unnamed module @35eb95d3
    at java.base/java.lang.reflect.AccessibleObject.checkCanSetAccessible(AccessibleObject.java:340)
    at java.base/java.lang.reflect.AccessibleObject.checkCanSetAccessible(AccessibleObject.java:280)
    at java.base/java.lang.reflect.Field.checkCanSetAccessible(Field.java:176)
    at java.base/java.lang.reflect.Field.setAccessible(Field.java:170)
    at net.sf.ehcache.pool.sizeof.ObjectGraphWalker.getAllFields(ObjectGraphWalker.java:271)
    at net.sf.ehcache.pool.sizeof.ObjectGraphWalker.getFilteredFields(ObjectGraphWalker.java:229)
    at net.sf.ehcache.pool.sizeof.ObjectGraphWalker.walk(ObjectGraphWalker.java:160)
    at net.sf.ehcache.pool.sizeof.SizeOf.deepSizeOf(SizeOf.java:72)
    at net.sf.ehcache.pool.impl.DefaultSizeOfEngine.sizeOf(DefaultSizeOfEngine.java:190)
    at net.sf.ehcache.pool.impl.AbstractPoolAccessor.add(AbstractPoolAccessor.java:63)
    at net.sf.ehcache.store.MemoryStore.put(MemoryStore.java:281)
    at net.sf.ehcache.Cache.putInternal(Cache.java:1616)
    at net.sf.ehcache.Cache.put(Cache.java:1542)
    at net.sf.ehcache.Cache.put(Cache.java:1507)
    at uk.ac.rdg.resc.edal.catalogue.DataCatalogue.getFeaturesForLayer(DataCatalogue.java:493)
    at uk.ac.rdg.resc.edal.graphics.style.GriddedImageLayer$MapFeatureDataReader.extractFeature(GriddedImageLayer.java:86)
    at uk.ac.rdg.resc.edal.graphics.style.GriddedImageLayer$MapFeatureDataReader.getFeature(GriddedImageLayer.java:77)
    at uk.ac.rdg.resc.edal.graphics.style.GriddedImageLayer$MapFeatureDataReader.getDataForLayerName(GriddedImageLayer.java:131)
    at uk.ac.rdg.resc.edal.graphics.style.RasterLayer.drawIntoImage(RasterLayer.java:73)
    at uk.ac.rdg.resc.edal.graphics.style.GriddedImageLayer.drawIntoImage(GriddedImageLayer.java:180)
    at uk.ac.rdg.resc.edal.graphics.style.ImageLayer.drawImage(ImageLayer.java:51)
    at uk.ac.rdg.resc.edal.graphics.style.MapImage.drawImage(MapImage.java:70)
    at uk.ac.rdg.resc.edal.wms.WmsServlet.getMap(WmsServlet.java:536)
    at uk.ac.rdg.resc.edal.wms.WmsServlet.dispatchWmsRequest(WmsServlet.java:368)
    at uk.ac.rdg.resc.edal.ncwms.NcwmsServlet.dispatchWmsRequest(NcwmsServlet.java:212)
    at uk.ac.rdg.resc.edal.wms.WmsServlet.doGet(WmsServlet.java:303)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:655)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:764)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:227)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162)
    at com.thetransactioncompany.cors.CORSFilter.doFilter(CORSFilter.java:168)
    at com.thetransactioncompany.cors.CORSFilter.doFilter(CORSFilter.java:233)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162)
    at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162)
    at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:197)
    at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:97)
    at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:540)
    at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:135)
    at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92)
    at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:687)
    at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:78)
    at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:357)
    at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:382)
    at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:65)
    at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:895)
    at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1722)
    at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)
    at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191)
    at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659)
    at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
    at java.base/java.lang.Thread.run(Thread.java:829)
john-jinghai-ma commented 2 years ago

A little more information, with the Suntans dataset, Time Series and Vertical Profile Plot/Download are not affected.

john-jinghai-ma commented 1 year ago

Tested on version 2.5.2, this issue remains: map won't update upon changing time or water depth/elevation. Data download has always been fine. This was tested on Suntans (unstructured) data. I have found a workaround however: Changing zoom level back and forth will make the map update for the new Time or Elevation value.