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RegulatoryGenomicsGroup / chicdiff

A differential caller for capture Hi-C data
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Error in getFullRegionData #9

Open gitgitmonkey opened 4 years ago

gitgitmonkey commented 4 years ago

I am running a 2 x 2 sample analysis and getting an early error:

output <- chicdiffPipeline(chicdiff.settings)

Running getRegionUniverse Running getControlRegionUniverse *** Running getFullRegionData Reading data for significant interactions

Reading Chicago dataset 1 of 4 : set1.arep1 Error in dispersions[i] <- attributes(x)$dispersion : replacement has length zero

I am willing to privately share data and code to reproduce this error. Please, let me know where to contact you to send the data. Thank you.

worchard commented 4 years ago

Sharing the data would be handy, thank you! Contact me at orchard@mrc-lmb.cam.ac.uk

joachimwolff commented 2 years ago

@gitgitmonkey Could you solve this issue? I am running into the identical one and would be happy for some insight on how to solve it.

Thanks and Best,

Joachim