GUI or workflow for running all scripts

ReinV / SCOPE

Search and Chemical Ontology Plotting Environment

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GUI or workflow for running all scripts #34

Closed magnuspalmblad closed 2 years ago

magnuspalmblad commented 3 years ago

It would be a good idea to combine the Python scripts in a simple GUI, notebook or workflow.

ReinV commented 2 years ago

What about Snakemake?

magnuspalmblad commented 2 years ago

Yes, Snakemake is quite popular in the Python world. Jupyter notebooks are also common, and then you do not need to change the code at all (and we could also insert some R code if we want, using rpy2. Either one would be fine I think.