Remi-Gau / nilearn

Machine learning for NeuroImaging in Python
http://nilearn.github.io
Other
1 stars 1 forks source link

dummy (Sourcery refactored) #9

Closed sourcery-ai[bot] closed 1 year ago

sourcery-ai[bot] commented 1 year ago

Pull Request #8 refactored by Sourcery.

If you're happy with these changes, merge this Pull Request using the Squash and merge strategy.

NOTE: As code is pushed to the original Pull Request, Sourcery will re-run and update (force-push) this Pull Request with new refactorings as necessary. If Sourcery finds no refactorings at any point, this Pull Request will be closed automatically.

See our documentation here.

Run Sourcery locally

Reduce the feedback loop during development by using the Sourcery editor plugin:

Review changes via command line

To manually merge these changes, make sure you're on the checklist branch, then run:

git fetch origin sourcery/checklist
git merge --ff-only FETCH_HEAD
git reset HEAD^

Help us improve this pull request!

github-actions[bot] commented 1 year ago

👋 @sourcery-ai[bot] Thanks for creating a PR!

Until this PR is ready for review, you can include the [WIP] tag in its title, or leave it as a github draft.

Please make sure it is compliant with our contributing guidelines. In particular, be sure it checks the boxes listed below.

For new features:

For bug fixes:

We will review it as quick as possible, feel free to ping us with questions if needed.

sourcery-ai[bot] commented 1 year ago

Sourcery Code Quality Report

✅  Merging this PR will increase code quality in the affected files by 0.24%.

Quality metrics Before After Change
Complexity 16.28 🙂 15.94 🙂 -0.34 👍
Method Length 167.63 😞 167.46 😞 -0.17 👍
Working memory 13.39 😞 13.37 😞 -0.02 👍
Quality 47.76% 😞 48.00% 😞 0.24% 👍
Other metrics Before After Change
Lines 3631 3624 -7
Changed files Quality Before Quality After Quality Change
examples/04_glm_first_level/plot_bids_features.py 48.54% 😞 48.53% 😞 -0.01% 👎
examples/04_glm_first_level/plot_predictions_residuals.py 38.08% 😞 38.09% 😞 0.01% 👍
nilearn/glm/second_level/second_level.py 49.07% 😞 49.56% 😞 0.49% 👍
nilearn/glm/tests/test_second_level.py 60.96% 🙂 60.94% 🙂 -0.02% 👎
nilearn/glm/tests/test_utils.py 71.24% 🙂 71.77% 🙂 0.53% 👍
nilearn/mass_univariate/permuted_least_squares.py 3.57% ⛔ 3.61% ⛔ 0.04% 👍
nilearn/reporting/_get_clusters_table.py 44.98% 😞 45.85% 😞 0.87% 👍

Here are some functions in these files that still need a tune-up:

File Function Complexity Length Working Memory Quality Recommendation
nilearn/mass_univariate/permuted_least_squares.py permuted_ols 84 ⛔ 1371 ⛔ 30 ⛔ 1.30% ⛔ Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions
nilearn/mass_univariate/permuted_least_squares.py _permuted_ols_on_chunk 30 😞 472 ⛔ 27 ⛔ 11.51% ⛔ Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions
nilearn/glm/second_level/second_level.py _check_second_level_input 52 ⛔ 245 ⛔ 14 😞 18.41% ⛔ Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions
nilearn/reporting/_get_clusters_table.py get_clusters_table 21 😞 438 ⛔ 20 ⛔ 19.76% ⛔ Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions
nilearn/glm/second_level/second_level.py non_parametric_inference 14 🙂 449 ⛔ 23 ⛔ 23.53% ⛔ Try splitting into smaller methods. Extract out complex expressions

Legend and Explanation

The emojis denote the absolute quality of the code:

The 👍 and 👎 indicate whether the quality has improved or gotten worse with this pull request.


Please see our documentation here for details on how these metrics are calculated.

We are actively working on this report - lots more documentation and extra metrics to come!

Help us improve this quality report!

codecov-commenter commented 1 year ago

Codecov Report

Merging #9 (d383e0d) into checklist (52ec59b) will increase coverage by 0.01%. The diff coverage is 95.45%.

@@              Coverage Diff              @@
##           checklist       #9      +/-   ##
=============================================
+ Coverage      91.01%   91.02%   +0.01%     
=============================================
  Files            133      133              
  Lines          15362    15352      -10     
  Branches        3035     3028       -7     
=============================================
- Hits           13981    13974       -7     
+ Misses           817      816       -1     
+ Partials         564      562       -2     
Impacted Files Coverage Δ
nilearn/glm/second_level/second_level.py 97.52% <95.00%> (+0.29%) :arrow_up:
nilearn/mass_univariate/permuted_least_squares.py 91.28% <100.00%> (+0.82%) :arrow_up:
nilearn/reporting/_get_clusters_table.py 97.14% <100.00%> (-0.06%) :arrow_down:

Help us with your feedback. Take ten seconds to tell us how you rate us. Have a feature suggestion? Share it here.