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RemiAllio / MitoFinder

MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data
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entrez-direct instructions to fetch mt from ncbi #28

Closed sam217pa closed 2 years ago

sam217pa commented 2 years ago

I needed the instructions for downloading mitochondrial genomes from NCBI to be reproductible. I used this command to reproduce the instructions provided on Mitofinder's README from the shell.

RemiAllio commented 2 years ago

Hi,

Thank you for this proposition. However, I uploaded a new Readme (including singularity commands) just before your commit. There are thus several incompatibilities between your readme and mine.

Please, could you cancel this commit, download the new readme and do it again? Also, can you change Lepidoptera to Carnivora to reproduce exactly the same example as provided in the readme? Sorry for the inconvenience... :disappointed:

I can also make the changes in the readme manually if that is easier and okay for you.

Cheers!

sam217pa commented 2 years ago

Ha ! I was working on it right now, but so did you apparently 😄 ! thanks for manually handling the change :)

RemiAllio commented 2 years ago

Haha I did the best I could! (I overwritten my previous commit with yours and rewrote mine :stuck_out_tongue:)

Thanks for your addition to the readme :slightly_smiling_face: You are now noted as a contributor on the github!

Cheers, Rémi