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ReproNim / neurodocker

Generate custom Docker and Singularity images, and minimize existing containers
https://www.repronim.org/neurodocker/
Apache License 2.0
326 stars 97 forks source link

Mcr missing deb libxp6 #526

Closed stebo85 closed 1 year ago

stebo85 commented 1 year ago

This deb file

http://mirrors.kernel.org/debian/pool/main/libx/libxp/libxp6_1.0.2-2_amd64.deb

doesn't exist anymore and currently the build of a recipe fails because of it.

codecov[bot] commented 1 year ago

Codecov Report

Patch and project coverage have no change.

Comparison is base (19b6a94) 88.77% compared to head (193e986) 88.77%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #526 +/- ## ======================================= Coverage 88.77% 88.77% ======================================= Files 11 11 Lines 1033 1033 ======================================= Hits 917 917 Misses 116 116 ``` Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ReproNim). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ReproNim)

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kaczmarj commented 1 year ago

thanks @stebo85 ! does this break any mcr functionality? do any of the executables link to libxp or libXp?

mattcieslak commented 1 year ago

This does seem to affect the AFNI builds on ubuntu. Any idea where that file went?

stebo85 commented 1 year ago

It might only affect older MCRs? In my tests I couldn't find a negative side-effect of this missing yet

kaczmarj commented 1 year ago

@mattcieslak - i have opened https://github.com/ReproNim/neurodocker/issues/528 to track the missing libxp6 deb for afni. i do not know where the file went, but it seems like the package libxp6 in general is not available on debian (https://packages.debian.org/search?keywords=libxp) or ubuntu (https://packages.ubuntu.com/search?keywords=libxp&searchon=names&suite=kinetic&section=all)