ReproNim / segstats_jsonld

Script to Export Freesurfer-based Parcellation/Segmentation Stats and Provenance as JSON-LD and NIDM
MIT License
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fix error message regarding tool name... #49

Open dnkennedy opened 1 year ago

dnkennedy commented 1 year ago

when I invoke the tool: "% segstats2nidm -add_de -f ..." and make an error, the error message says:

"usage: fs_to_nidm.py [-h] ..."

So, what is the actual tool name, and can we use the same name in the tool invocation and tool usage message?

dbkeator commented 1 year ago

HI,

That’s the tool name once you install it. After pulling the latest updates do a “pip install -e .” in the directory where you downloaded the github repo and that will make “segstats2nidm” available as a command on your command line without typing the path to fs_to_nidm.py. It's the same thing…just an alias was created called segstats2nidm.

Cheers, Dave

From: David Kennedy @.> Date: Saturday, September 30, 2023 at 9:17 AM To: ReproNim/segstats_jsonld @.> Cc: Subscribed @.***> Subject: [ReproNim/segstats_jsonld] fix error message regarding tool name... (Issue #49)

when I invoke the tool: "% segstats2nidm -add_de -f ..." and make an error, the error message says:

"usage: fs_to_nidm.py [-h] ..."

So, what is the actual tool name, and can we use the same name in the tool invocation and tool usage message?

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