search

ReproNim / sfn2018-training

Materials for SfN 2018 training event
http://repronim.org/sfn2018-training
2 stars 5 forks source link

Remaining references to ohbm2018- (VMs and containers) #1

Open yarikoptic opened 5 years ago

yarikoptic commented 5 years ago

Within the master and gh-pages branches there are still references to the ohbm2018- VMs and containers which come from repronim or other "users and organizations", e.g. as the ones from myyoda and mih. Ideally everything in our materials should be self-contained and specific to the training event. Here are some we might consider adjusting for

gh-pages

$> git grep ohbm2018
_episodes/03-01-reproin.md:shub://ReproNim/ohbm2018-training:heudiconvn (a local copy is available at
_episodes/03-01-reproin.md:> > % # datalad containers-add heudiconv --url shub://ReproNim/ohbm2018-training:heudiconvn
_episodes/03-01-reproin.md:   FSL can understand, available at <https://raw.githubusercontent.com/myyoda/ohbm2018-training/master/section23/scripts/events2ev3.sh>
_episodes/03-01-reproin.md:2. an FSL analysis configuration template script available at <https://raw.githubusercontent.com/myyoda/ohbm2018-training/master/section23/scripts/ffa_design.fsf>
_episodes/03-01-reproin.md:> >   https://raw.githubusercontent.com/myyoda/ohbm2018-training/master/section23/scripts/events2ev3.sh \
_episodes/03-01-reproin.md:> >   https://raw.githubusercontent.com/myyoda/ohbm2018-training/master/section23/scripts/ffa_design.fsf
_episodes/03-01-reproin.md:shub://ReproNim/ohbm2018-training:fsln (a local copy is available at
_episodes/03-01-reproin.md:> > % datalad containers-add fsl --url shub://ReproNim/ohbm2018-training:fsln
fig/yoda-schemata-1.svg:   inkscape:export-filename="/home/yoh/proj/repronim/training/module-ohbm2018-basics/fig/yoda-schemata-1.png"
fsl_glm_w_amazing_datalad.sh:datalad containers-add heudiconv -u shub://mih/ohbm2018-training:heudiconv
fsl_glm_w_amazing_datalad.sh:datalad containers-add heudiconv -u shub://mih/ohbm2018-training:fsl

master

$> git grep ohbm2018                           
section23/fsl_glm_in_image.sh:datalad containers-add fsl -u shub://ReproNim/ohbm2018-training:fsln \
section23/fsl_glm_magdeburg_style.sh:datalad containers-add conversion -u shub://mih/ohbm2018-training:heudiconv
section23/fsl_glm_magdeburg_style.sh:datalad containers-add fsl -u shub://mih/ohbm2018-training:fsl
section23/fsl_glm_w_amazing_datalad.sh:datalad containers-add heudiconv -u shub://ReproNim/ohbm2018-training:heudiconvn \
section23/fsl_glm_w_amazing_datalad.sh:datalad containers-add fsl -u shub://ReproNim/ohbm2018-training:fsln \
vm/README.txt:    (place in "ohbm2018-training/vm")
vm/README.txt:    (place in "ohbm2018-training/vm/files")
vm/Vagrantfile:#           password: ohbm2018
satra commented 5 years ago

@yarikoptic - indeed - also we can keep the containers from ohbm-2018 hub account for now though, but update the other pieces.