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ReproNim / testkraken

Generalized regression testing of scientific workflows
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testkraken on a sample workflow doesn't work for me: FileNotFoundError #97

Closed yarikoptic closed 3 years ago

yarikoptic commented 3 years ago
testkraken workflows4regtests/basic_examples/sorting_array_conda/ ```bash (git)lena:~/proj/repronim/testkraken[master]git $> TMPDIR=/tmp testkraken workflows4regtests/basic_examples/sorting_array_conda/ running testkraken for workflows4regtests/basic_examples/sorting_array_conda/; working directory - None + building 4 Docker images ++ building image: {'pkg_manager': 'apt', 'instructions': (('base', 'debian:stretch'), ('miniconda', {'create_env': 'testkraken', 'activate': True, 'conda_install': ['python=3.7', 'numpy']}))} Sending build context to Docker daemon 5.632kB Step 1/9 : FROM debian:stretch ---> 62ace29a8c8f Step 2/9 : USER root ---> Using cache ---> 0a0242cabb6b Step 3/9 : ARG DEBIAN_FRONTEND="noninteractive" ---> Using cache ---> 9b5957f75547 Step 4/9 : ENV LANG="en_US.UTF-8" LC_ALL="en_US.UTF-8" ND_ENTRYPOINT="/neurodocker/startup.sh" ---> Using cache ---> ee7c9c814662 Step 5/9 : RUN export ND_ENTRYPOINT="/neurodocker/startup.sh" && apt-get update -qq && apt-get install -y -q --no-install-recommends apt-utils bzip2 ca-certificates curl locales unzip && apt-get clean && rm -rf /var/lib/apt/lists/* && sed -i -e 's/# en_US.UTF-8 UTF-8/en_US.UTF-8 UTF-8/' /etc/locale.gen && dpkg-reconfigure --frontend=noninteractive locales && update-locale LANG="en_US.UTF-8" && chmod 777 /opt && chmod a+s /opt && mkdir -p /neurodocker && if [ ! -f "$ND_ENTRYPOINT" ]; then echo '#!/usr/bin/env bash' >> "$ND_ENTRYPOINT" && echo 'set -e' >> "$ND_ENTRYPOINT" && echo 'export USER="${USER:=`whoami`}"' >> "$ND_ENTRYPOINT" && echo 'if [ -n "$1" ]; then "$@"; else /usr/bin/env bash; fi' >> "$ND_ENTRYPOINT"; fi && chmod -R 777 /neurodocker && chmod a+s /neurodocker ---> Using cache ---> 2ffd82e60498 Step 6/9 : ENTRYPOINT ["/neurodocker/startup.sh"] ---> Using cache ---> fe1ff4b56fc6 Step 7/9 : ENV CONDA_DIR="/opt/miniconda-latest" PATH="/opt/miniconda-latest/bin:$PATH" ---> Using cache ---> 98366a65c3c5 Step 8/9 : RUN export PATH="/opt/miniconda-latest/bin:$PATH" && echo "Downloading Miniconda installer ..." && conda_installer="/tmp/miniconda.sh" && curl -fsSL --retry 5 -o "$conda_installer" https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh && bash "$conda_installer" -b -p /opt/miniconda-latest && rm -f "$conda_installer" && conda update -yq -nbase conda && conda config --system --prepend channels conda-forge && conda config --system --set auto_update_conda false && conda config --system --set show_channel_urls true && sync && conda clean -y --all && sync && conda create -y -q --name testkraken && conda install -y -q --name testkraken "python=3.7" "numpy" && sync && conda clean -y --all && sync && sed -i '$isource activate testkraken' $ND_ENTRYPOINT ---> Using cache ---> 2ba6c3b37b85 Step 9/9 : RUN echo '{ \n "pkg_manager": "apt", \n "instructions": [ \n [ \n "base", \n "debian:stretch" \n ], \n [ \n "miniconda", \n { \n "create_env": "testkraken", \n "activate": true, \n "conda_install": [ \n "python=3.7", \n "numpy" \n ] \n } \n ] \n ] \n}' > /neurodocker/neurodocker_specs.json ---> Using cache ---> b4eadc75d43d Successfully built b4eadc75d43d Successfully tagged repronim/testkraken:234897b2e41f47658e94c800426e2ae70bbc947d ++ building image: {'pkg_manager': 'apt', 'instructions': (('base', 'debian:stretch'), ('miniconda', {'create_env': 'testkraken', 'activate': True, 'conda_install': ['python=2.7', 'numpy']}))} Sending build context to Docker daemon 10.24kB Step 1/9 : FROM debian:stretch ---> 62ace29a8c8f Step 2/9 : USER root ---> Using cache ---> 0a0242cabb6b Step 3/9 : ARG DEBIAN_FRONTEND="noninteractive" ---> Using cache ---> 9b5957f75547 Step 4/9 : ENV LANG="en_US.UTF-8" LC_ALL="en_US.UTF-8" ND_ENTRYPOINT="/neurodocker/startup.sh" ---> Using cache ---> ee7c9c814662 Step 5/9 : RUN export ND_ENTRYPOINT="/neurodocker/startup.sh" && apt-get update -qq && apt-get install -y -q --no-install-recommends apt-utils bzip2 ca-certificates curl locales unzip && apt-get clean && rm -rf /var/lib/apt/lists/* && sed -i -e 's/# en_US.UTF-8 UTF-8/en_US.UTF-8 UTF-8/' /etc/locale.gen && dpkg-reconfigure --frontend=noninteractive locales && update-locale LANG="en_US.UTF-8" && chmod 777 /opt && chmod a+s /opt && mkdir -p /neurodocker && if [ ! -f "$ND_ENTRYPOINT" ]; then echo '#!/usr/bin/env bash' >> "$ND_ENTRYPOINT" && echo 'set -e' >> "$ND_ENTRYPOINT" && echo 'export USER="${USER:=`whoami`}"' >> "$ND_ENTRYPOINT" && echo 'if [ -n "$1" ]; then "$@"; else /usr/bin/env bash; fi' >> "$ND_ENTRYPOINT"; fi && chmod -R 777 /neurodocker && chmod a+s /neurodocker ---> Using cache ---> 2ffd82e60498 Step 6/9 : ENTRYPOINT ["/neurodocker/startup.sh"] ---> Using cache ---> fe1ff4b56fc6 Step 7/9 : ENV CONDA_DIR="/opt/miniconda-latest" PATH="/opt/miniconda-latest/bin:$PATH" ---> Using cache ---> 98366a65c3c5 Step 8/9 : RUN export PATH="/opt/miniconda-latest/bin:$PATH" && echo "Downloading Miniconda installer ..." && conda_installer="/tmp/miniconda.sh" && curl -fsSL --retry 5 -o "$conda_installer" https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh && bash "$conda_installer" -b -p /opt/miniconda-latest && rm -f "$conda_installer" && conda update -yq -nbase conda && conda config --system --prepend channels conda-forge && conda config --system --set auto_update_conda false && conda config --system --set show_channel_urls true && sync && conda clean -y --all && sync && conda create -y -q --name testkraken && conda install -y -q --name testkraken "python=2.7" "numpy" && sync && conda clean -y --all && sync && sed -i '$isource activate testkraken' $ND_ENTRYPOINT ---> Using cache ---> bfdb2b751cc6 Step 9/9 : RUN echo '{ \n "pkg_manager": "apt", \n "instructions": [ \n [ \n "base", \n "debian:stretch" \n ], \n [ \n "miniconda", \n { \n "create_env": "testkraken", \n "activate": true, \n "conda_install": [ \n "python=2.7", \n "numpy" \n ] \n } \n ] \n ] \n}' > /neurodocker/neurodocker_specs.json ---> Using cache ---> 925853be21ab Successfully built 925853be21ab Successfully tagged repronim/testkraken:2cada4cd32e2ba3c8ecf1a6d62c4720cdd8a6360 ++ building image: {'pkg_manager': 'apt', 'instructions': (('base', 'ubuntu:16.04'), ('miniconda', {'create_env': 'testkraken', 'activate': True, 'conda_install': ['python=3.7', 'numpy']}))} Sending build context to Docker daemon 14.85kB Step 1/9 : FROM ubuntu:16.04 ---> 8185511cd5ad Step 2/9 : USER root ---> Using cache ---> 2a3b6e5207f5 Step 3/9 : ARG DEBIAN_FRONTEND="noninteractive" ---> Using cache ---> 3c2377d387ef Step 4/9 : ENV LANG="en_US.UTF-8" LC_ALL="en_US.UTF-8" ND_ENTRYPOINT="/neurodocker/startup.sh" ---> Using cache ---> b6bc7f5e5771 Step 5/9 : RUN export ND_ENTRYPOINT="/neurodocker/startup.sh" && apt-get update -qq && apt-get install -y -q --no-install-recommends apt-utils bzip2 ca-certificates curl locales unzip && apt-get clean && rm -rf /var/lib/apt/lists/* && sed -i -e 's/# en_US.UTF-8 UTF-8/en_US.UTF-8 UTF-8/' /etc/locale.gen && dpkg-reconfigure --frontend=noninteractive locales && update-locale LANG="en_US.UTF-8" && chmod 777 /opt && chmod a+s /opt && mkdir -p /neurodocker && if [ ! -f "$ND_ENTRYPOINT" ]; then echo '#!/usr/bin/env bash' >> "$ND_ENTRYPOINT" && echo 'set -e' >> "$ND_ENTRYPOINT" && echo 'export USER="${USER:=`whoami`}"' >> "$ND_ENTRYPOINT" && echo 'if [ -n "$1" ]; then "$@"; else /usr/bin/env bash; fi' >> "$ND_ENTRYPOINT"; fi && chmod -R 777 /neurodocker && chmod a+s /neurodocker ---> Using cache ---> ade3705946fa Step 6/9 : ENTRYPOINT ["/neurodocker/startup.sh"] ---> Using cache ---> a78a1f23f03e Step 7/9 : ENV CONDA_DIR="/opt/miniconda-latest" PATH="/opt/miniconda-latest/bin:$PATH" ---> Using cache ---> bb15a06fc1d4 Step 8/9 : RUN export PATH="/opt/miniconda-latest/bin:$PATH" && echo "Downloading Miniconda installer ..." && conda_installer="/tmp/miniconda.sh" && curl -fsSL --retry 5 -o "$conda_installer" https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh && bash "$conda_installer" -b -p /opt/miniconda-latest && rm -f "$conda_installer" && conda update -yq -nbase conda && conda config --system --prepend channels conda-forge && conda config --system --set auto_update_conda false && conda config --system --set show_channel_urls true && sync && conda clean -y --all && sync && conda create -y -q --name testkraken && conda install -y -q --name testkraken "python=3.7" "numpy" && sync && conda clean -y --all && sync && sed -i '$isource activate testkraken' $ND_ENTRYPOINT ---> Using cache ---> 5daada26bbb2 Step 9/9 : RUN echo '{ \n "pkg_manager": "apt", \n "instructions": [ \n [ \n "base", \n "ubuntu:16.04" \n ], \n [ \n "miniconda", \n { \n "create_env": "testkraken", \n "activate": true, \n "conda_install": [ \n "python=3.7", \n "numpy" \n ] \n } \n ] \n ] \n}' > /neurodocker/neurodocker_specs.json ---> Using cache ---> 7fbe88d9f5aa Successfully built 7fbe88d9f5aa Successfully tagged repronim/testkraken:12511be05fce231bc8e6048494c3c6a9bb996e60 ++ building image: {'pkg_manager': 'apt', 'instructions': (('base', 'ubuntu:16.04'), ('miniconda', {'create_env': 'testkraken', 'activate': True, 'conda_install': ['python=2.7', 'numpy']}))} Sending build context to Docker daemon 19.46kB Step 1/9 : FROM ubuntu:16.04 ---> 8185511cd5ad Step 2/9 : USER root ---> Using cache ---> 2a3b6e5207f5 Step 3/9 : ARG DEBIAN_FRONTEND="noninteractive" ---> Using cache ---> 3c2377d387ef Step 4/9 : ENV LANG="en_US.UTF-8" LC_ALL="en_US.UTF-8" ND_ENTRYPOINT="/neurodocker/startup.sh" ---> Using cache ---> b6bc7f5e5771 Step 5/9 : RUN export ND_ENTRYPOINT="/neurodocker/startup.sh" && apt-get update -qq && apt-get install -y -q --no-install-recommends apt-utils bzip2 ca-certificates curl locales unzip && apt-get clean && rm -rf /var/lib/apt/lists/* && sed -i -e 's/# en_US.UTF-8 UTF-8/en_US.UTF-8 UTF-8/' /etc/locale.gen && dpkg-reconfigure --frontend=noninteractive locales && update-locale LANG="en_US.UTF-8" && chmod 777 /opt && chmod a+s /opt && mkdir -p /neurodocker && if [ ! -f "$ND_ENTRYPOINT" ]; then echo '#!/usr/bin/env bash' >> "$ND_ENTRYPOINT" && echo 'set -e' >> "$ND_ENTRYPOINT" && echo 'export USER="${USER:=`whoami`}"' >> "$ND_ENTRYPOINT" && echo 'if [ -n "$1" ]; then "$@"; else /usr/bin/env bash; fi' >> "$ND_ENTRYPOINT"; fi && chmod -R 777 /neurodocker && chmod a+s /neurodocker ---> Using cache ---> ade3705946fa Step 6/9 : ENTRYPOINT ["/neurodocker/startup.sh"] ---> Using cache ---> a78a1f23f03e Step 7/9 : ENV CONDA_DIR="/opt/miniconda-latest" PATH="/opt/miniconda-latest/bin:$PATH" ---> Using cache ---> bb15a06fc1d4 Step 8/9 : RUN export PATH="/opt/miniconda-latest/bin:$PATH" && echo "Downloading Miniconda installer ..." && conda_installer="/tmp/miniconda.sh" && curl -fsSL --retry 5 -o "$conda_installer" https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh && bash "$conda_installer" -b -p /opt/miniconda-latest && rm -f "$conda_installer" && conda update -yq -nbase conda && conda config --system --prepend channels conda-forge && conda config --system --set auto_update_conda false && conda config --system --set show_channel_urls true && sync && conda clean -y --all && sync && conda create -y -q --name testkraken && conda install -y -q --name testkraken "python=2.7" "numpy" && sync && conda clean -y --all && sync && sed -i '$isource activate testkraken' $ND_ENTRYPOINT ---> Using cache ---> d128b936699c Step 9/9 : RUN echo '{ \n "pkg_manager": "apt", \n "instructions": [ \n [ \n "base", \n "ubuntu:16.04" \n ], \n [ \n "miniconda", \n { \n "create_env": "testkraken", \n "activate": true, \n "conda_install": [ \n "python=2.7", \n "numpy" \n ] \n } \n ] \n ] \n}' > /neurodocker/neurodocker_specs.json ---> Using cache ---> d492f69648ea Successfully built d492f69648ea Successfully tagged repronim/testkraken:07f17664156187d5c24965c5d258c80f77b815e4 running pydra workflow for workflows4regtests/basic_examples/sorting_array_conda in working directory - /tmp/testkraken-sorting_array_condagxfd_b50 Task exception was never retrieved future: exception=FileNotFoundError("the file from script input does not exist, if the file comes from the container, use field.metadata['container_path']=True")> concurrent.futures.process._RemoteTraceback: """ Traceback (most recent call last): File "/usr/lib/python3.9/concurrent/futures/process.py", line 243, in _process_worker r = call_item.fn(*call_item.args, **call_item.kwargs) File "/home/yoh/proj/repronim/testkraken/venvs/dev3/lib/python3.9/site-packages/pydra/engine/core.py", line 431, in _run self.inputs.check_fields_input_spec() File "/home/yoh/proj/repronim/testkraken/venvs/dev3/lib/python3.9/site-packages/pydra/engine/specs.py", line 183, in check_fields_input_spec self._file_check_n_bindings(fld) File "/home/yoh/proj/repronim/testkraken/venvs/dev3/lib/python3.9/site-packages/pydra/engine/specs.py", line 706, in _file_check_n_bindings raise FileNotFoundError( FileNotFoundError: the file from script input does not exist, if the file comes from the container, use field.metadata['container_path']=True """ The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/home/yoh/proj/repronim/testkraken/venvs/dev3/lib/python3.9/site-packages/pydra/engine/workers.py", line 163, in exec_as_coro res = await self.loop.run_in_executor(self.pool, runnable._run, rerun) FileNotFoundError: the file from script input does not exist, if the file comes from the container, use field.metadata['container_path']=True ```
pip list ```shell Package Version Location ------------------------------------------------ ----------------------- ---------------------------------- adal 1.2.2 aiohttp 3.6.2 alabaster 0.7.8 altair 4.1.0 annexremote 1.4.3 ansible 2.9.16 apache-libcloud 3.2.0 apipkg 1.5 appdirs 1.4.4 apsw 3.32.2.post1 arcp 0.2.1 argcomplete 1.8.1 argon2-cffi 18.3.0 arrow 0.17.0 asciinema 2.0.2 asgiref 3.3.0 asn1crypto 1.4.0 astroid 2.4.2 async-timeout 3.0.1 atomicwrites 1.4.0 attrs 20.3.0 Automat 20.2.0 avro-python3 1.10.1 awscli 1.18.135 azure-ai-anomalydetector 3.0.0b2 azure-ai-formrecognizer 3.1.0b2 azure-ai-metricsadvisor 1.0.0b3 azure-ai-textanalytics 5.1.0b4 azure-appconfiguration 1.1.2 azure-applicationinsights 0.1.0 azure-batch 9.0.1 azure-cognitiveservices-anomalydetector 0.3.0 azure-cognitiveservices-formrecognizer 0.1.1 azure-cognitiveservices-knowledge-qnamaker 0.3.0 azure-cognitiveservices-language-luis 0.7.0 azure-cognitiveservices-language-spellcheck 2.0.0 azure-cognitiveservices-language-textanalytics 0.2.0 azure-cognitiveservices-personalizer 0.1.0 azure-cognitiveservices-search-autosuggest 0.2.0 azure-cognitiveservices-search-customimagesearch 0.2.0 azure-cognitiveservices-search-customsearch 0.3.0 azure-cognitiveservices-search-entitysearch 2.0.0 azure-cognitiveservices-search-imagesearch 2.0.0 azure-cognitiveservices-search-newssearch 2.0.0 azure-cognitiveservices-search-videosearch 2.0.0 azure-cognitiveservices-search-visualsearch 0.2.0 azure-cognitiveservices-search-websearch 2.0.0 azure-cognitiveservices-vision-computervision 0.7.0 azure-cognitiveservices-vision-contentmoderator 1.0.0 azure-cognitiveservices-vision-customvision 3.1.0 azure-cognitiveservices-vision-face 0.4.1 azure-common 1.1.27 azure-communication-administration 1.0.0b4 azure-communication-chat 1.0.0b4 azure-communication-sms 1.0.0b5 azure-core 1.9.1 azure-data-tables 12.0.0b4 azure-digitaltwins-core 1.1.0 azure-eventgrid 2.0.0b5 azure-eventhub 5.2.1 azure-eventhub-checkpointstoreblob 1.1.2 azure-eventhub-checkpointstoreblob-aio 1.1.2 azure-graphrbac 0.61.1 azure-identity 1.5.1 azure-keyvault 4.1.0 azure-keyvault-administration 4.0.0b3 azure-keyvault-certificates 4.2.2 azure-keyvault-keys 4.3.2 azure-keyvault-secrets 4.2.1 azure-loganalytics 0.1.0 azure-mgmt-advisor 9.0.0b1 azure-mgmt-alertsmanagement 1.0.0b1 azure-mgmt-apimanagement 1.0.0b1 azure-mgmt-appconfiguration 1.0.1 azure-mgmt-applicationinsights 0.3.1 azure-mgmt-appplatform 6.0.0b1 azure-mgmt-attestation 0.2.0 azure-mgmt-authorization 1.0.0 azure-mgmt-automanage 1.0.0b1 azure-mgmt-automation 1.0.0b1 azure-mgmt-azurestack 0.1.0 azure-mgmt-baremetalinfrastructure 1.0.0b1 azure-mgmt-batch 14.0.0b1 azure-mgmt-billing 6.0.0b1 azure-mgmt-botservice 0.2.0 azure-mgmt-cdn 10.0.0b1 azure-mgmt-cognitiveservices 11.0.0b1 azure-mgmt-commerce 6.0.0b1 azure-mgmt-communication 1.0.0b5 azure-mgmt-compute 18.0.0 azure-mgmt-confluent 1.0.0b1 azure-mgmt-consumption 8.0.0b1 azure-mgmt-containerinstance 7.0.0 azure-mgmt-containerregistry 8.0.0b1 azure-mgmt-containerservice 14.0.0 azure-mgmt-core 1.2.3 azure-mgmt-cosmosdb 6.0.0 azure-mgmt-costmanagement 0.2.0 azure-mgmt-customproviders 1.0.0b1 azure-mgmt-databox 1.0.0b1 azure-mgmt-databoxedge 1.0.0b1 azure-mgmt-databricks 1.0.0b1 azure-mgmt-datadog 1.0.0b2 azure-mgmt-datafactory 1.0.0b1 azure-mgmt-datalake-analytics 0.6.0 azure-mgmt-datalake-store 1.0.0b1 azure-mgmt-datamigration 4.0.0 azure-mgmt-datashare 1.0.0b1 azure-mgmt-deploymentmanager 1.0.0b1 azure-mgmt-devspaces 0.2.0 azure-mgmt-devtestlabs 9.0.0b1 azure-mgmt-digitaltwins 0.1.0 azure-mgmt-dns 3.0.0 azure-mgmt-documentdb 0.1.3 azure-mgmt-edgegateway 0.1.0 azure-mgmt-eventgrid 8.0.0b1 azure-mgmt-eventhub 8.0.0 azure-mgmt-frontdoor 0.3.0 azure-mgmt-hanaonazure 1.0.0b1 azure-mgmt-hdinsight 7.0.0b1 azure-mgmt-healthcareapis 1.0.0b1 azure-mgmt-hybridcompute 7.0.0b1 azure-mgmt-hybridkubernetes 0.1.0 azure-mgmt-imagebuilder 0.4.0 azure-mgmt-iotcentral 3.0.0 azure-mgmt-iothub 1.0.0b1 azure-mgmt-iothubprovisioningservices 0.2.0 azure-mgmt-keyvault 8.0.0 azure-mgmt-kubernetesconfiguration 0.2.0 azure-mgmt-kusto 1.0.0b1 azure-mgmt-labservices 1.0.0b1 azure-mgmt-loganalytics 7.0.0b1 azure-mgmt-logic 9.0.0b1 azure-mgmt-machinelearningcompute 0.4.1 azure-mgmt-machinelearningservices 1.0.0b1 azure-mgmt-maintenance 1.0.0b1 azure-mgmt-managedservices 6.0.0b1 azure-mgmt-managementgroups 0.2.0 azure-mgmt-managementpartner 0.1.1 azure-mgmt-maps 1.0.0b1 azure-mgmt-marketplaceordering 1.0.0b1 azure-mgmt-media 2.2.0 azure-mgmt-mixedreality 0.1.0 azure-mgmt-monitor 1.0.1 azure-mgmt-msi 1.0.0 azure-mgmt-netapp 1.0.0b1 azure-mgmt-network 17.0.0 azure-mgmt-notificationhubs 7.0.0b1 azure-mgmt-operationsmanagement 1.0.0b1 azure-mgmt-peering 1.0.0b1 azure-mgmt-policyinsights 1.0.0b1 azure-mgmt-powerbidedicated 1.0.0b1 azure-mgmt-powerbiembedded 2.0.0 azure-mgmt-privatedns 0.1.0 azure-mgmt-rdbms 8.0.0b1 azure-mgmt-recoveryservices 1.0.0b1 azure-mgmt-recoveryservicesbackup 0.7.0 azure-mgmt-redhatopenshift 0.1.0 azure-mgmt-redis 12.0.0 azure-mgmt-regionmove 1.0.0b1 azure-mgmt-relay 1.0.0b1 azure-mgmt-reservations 0.7.0 azure-mgmt-resource 15.0.0 azure-mgmt-resourcegraph 7.0.0b1 azure-mgmt-resourcemover 1.0.1b1 azure-mgmt-scheduler 7.0.0b1 azure-mgmt-search 8.0.0b1 azure-mgmt-security 1.0.0b1 azure-mgmt-securityinsight 1.0.0b1 azure-mgmt-serialconsole 0.1.0 azure-mgmt-servermanager 2.0.0 azure-mgmt-servicebus 6.0.0 azure-mgmt-servicefabric 0.4.0 azure-mgmt-signalr 1.0.0b1 azure-mgmt-sql 1.0.0 azure-mgmt-sqlvirtualmachine 0.5.0 azure-mgmt-storage 16.0.0 azure-mgmt-storagecache 0.3.0 azure-mgmt-storageimportexport 0.1.0 azure-mgmt-storagesync 0.2.0 azure-mgmt-streamanalytics 1.0.0rc1 azure-mgmt-subscription 1.0.0b1 azure-mgmt-support 6.0.0b1 azure-mgmt-synapse 0.2.0 azure-mgmt-timeseriesinsights 0.2.0 azure-mgmt-trafficmanager 0.51.0 azure-mgmt-vmwarecloudsimple 0.2.0 azure-mgmt-web 1.0.0 azure-mgmt-workloadmonitor 1.0.0b2 azure-schemaregistry 1.0.0b2 azure-schemaregistry-avroserializer 1.0.0b2 azure-search-documents 11.1.0b5 azure-servicebus 7.0.1 azure-servicefabric 7.2.0.46 azure-servicemanagement-legacy 0.20.7 azure-storage-blob 12.7.0b1 azure-storage-blob-changefeed 12.0.0b3 azure-storage-file-datalake 12.2.1 azure-storage-file-share 12.4.0b1 azure-storage-queue 12.1.5 azure-synapse 0.1.0 azure-synapse-accesscontrol 0.4.0 azure-synapse-artifacts 0.4.0 azure-synapse-managedprivateendpoints 0.1.0 azure-synapse-monitoring 0.1.0 azure-synapse-spark 0.4.0 azure-template 0.0.18b3 Babel 2.8.0 backcall 0.2.0 base58 1.0.3 bcrypt 3.1.7 beautifulsoup4 4.9.3 binaryornot 0.4.3 binwalk 2.2.0 biopython 1.78 black 20.8b1 bleach 3.2.1 blessings 1.6 blinker 1.4 blosc 1.8.1 boto 2.49.0 boto3 1.13.14 botocore 1.17.22 bottle 0.12.15 Bottleneck 1.2.1 breezy 3.1.0 Brlapi 0.8.0 Brotli 1.0.9 brz-etckeeper 0.0.0 bsddb3 6.2.9 bz2file 0.98 CacheControl 0.12.6 cached-property 1.5.2 cachetools 4.2.0 catfish 1.4.13 certifi 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virtualenv-clone 0.3.0 vmdb2 0.22 vobject 0.9.6.1 w3lib 1.22.0 wadllib 1.3.4 wcwidth 0.1.9 webencodings 0.5.1 WebOb 1.8.6 websocket-client 0.57.0 Werkzeug 1.0.1 wget 3.2 wheel 0.34.2 whichcraft 0.4.1 Whoosh 2.7.4 widgetsnbextension 2.0.0 wrapt 1.12.1 wsproto 0.15.0 wxPython 4.0.7 xarray 0.16.1 xlrd 1.1.0 XlsxWriter 1.1.2 xlwt 1.3.0 xmltodict 0.12.0 xonsh 0.9.24 yamllint 1.24.2 yappi 1.0 yarl 1.4.2 youtube-dl 2020.11.29 zeroconf 0.26.1 zipp 1.0.0 zope.interface 5.1.2 ```
djarecka commented 3 years ago

@yarikoptic - i've recreated the issue... not sure when I broke it, but will fix it

djarecka commented 3 years ago

cli just didn't work correctly for relative paths... I forgot about it, since i usually use tests to run, not cli. #104 should fix it