rjandr
commented
3 years ago Tested on system without homebrew to see if that was issue, but the same error popped up.
Closed njbooher closed 3 years ago
rjandr
commented
3 years ago Tested on system without homebrew to see if that was issue, but the same error popped up.
njbooher
commented
3 years ago https://github.com/igvteam/igv/blob/master/src/main/java/org/broad/igv/util/RuntimeUtils.java#L89
IGV apparently is just looking for the word 'error' in output. Will probably update run_scanfold.py to filter out hash function messages.
njbooher
commented
3 years ago https://github.com/ResearchIT/scanfoldigv/commit/2366c794af9ea32569b788bda20f2817b8a64a50 pretty sure this takes care of it
It still works. Find a way to silence the warnings from Python.