search

ResearchIT / IGV-ScanFold

IGV + RNA folding tools
4 stars 2 forks source link

Windows bundle not running ScanFold #12

Closed wbrouse closed 3 years ago

wbrouse commented 3 years ago

When trying to run ScanFold on both the entire visible region and a targeted region the log output window says done immediately after clicking run. No data is generated but it says that is completed. The screenshot below displays this issue. The release being used is 1.0.7. IGVWindowsProblem

njbooher commented 3 years ago

What version of Windows?

https://support.microsoft.com/en-us/windows/see-which-version-of-windows-10-you-have-12d35019-4da9-0cb1-ba47-f8b031b712ad

Also does it say '64-bit operating system' or '32-bit operating system' ?

wbrouse commented 3 years ago

Both were Windows 10 and 64-bit operating systems.

On Fri, Mar 5, 2021 at 5:32 PM Nick Booher notifications@github.com wrote:

What version of Windows?

https://support.microsoft.com/en-us/windows/see-which-version-of-windows-10-you-have-12d35019-4da9-0cb1-ba47-f8b031b712ad

Also does it say '64-bit operating system' or '32-bit operating system' ?

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/ResearchIT/scanfoldigv/issues/12#issuecomment-791788325, or unsubscribe https://github.com/notifications/unsubscribe-auth/AOO4TJIGYR4FHJBPVYYDU4LTCFSZZANCNFSM4YWBUOGA .

njbooher commented 3 years ago

Can you attach igv.log from your User folder.,

e.g.

C:\Users\Nick\igv\igv.log

wbrouse commented 3 years ago

I think I figured out the issue. We were following the readme, which said to use the IGV.bat or IGV-launcher.bat instead of the runme.bat. When I use the runme.bat everything works.

On Fri, Mar 5, 2021 at 5:50 PM Nick Booher notifications@github.com wrote:

Can you attach igv.log from your User folder

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/ResearchIT/scanfoldigv/issues/12#issuecomment-791796946, or unsubscribe https://github.com/notifications/unsubscribe-auth/AOO4TJJ5UFXRNU6XIXXBXPDTCFU4LANCNFSM4YWBUOGA .

rjandr commented 3 years ago

We may need to put a readme in the top folder to explain that we just need to use the runme.bat (or make an enhancement). There are other readmes (like in the IGV folder) that could complicate things.