Rfam / rfam-3d-seed-alignments

A pipeline for adding RNA 3D structures to Rfam seed alignments
Apache License 2.0
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Add RNA 3D motif annotations per PDB file #8

Open AntonPetrov opened 2 years ago

AntonPetrov commented 2 years ago

We should provide RNA 3D motif annotations per PDB file similar to how secondary structure is included for each PDB file. This would be more correct that providing family-level motif annotations because there may not be enough evidence to support the existence of a certain 3D motif in all members of the family.

This can be done (semi-)automatically using the RNA 3D Hub API to get a list of motifs and their locations.