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RfastOfficial / Rfast

A collection of Rfast functions for data analysis. Note 1: The vast majority of the functions accept matrices only, not data.frames. Note 2: Do not have matrices or vectors with have missing data (i.e NAs). We do no check about them and C++ internally transforms them into zeros (0), so you may get wrong results. Note 3: In general, make sure you give the correct input, in order to get the correct output. We do no checks and this is one of the many reasons we are fast.
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Alamalinux install issue #113

Open anusurendra opened 1 month ago

anusurendra commented 1 month ago

Hi,

I am having an issue installing RFast. I am getting the following error:

In file included from ../inst/include/Rfast/templates.h:10,
                 from ../inst/include/Rfast/matrix.hpp:14,
                 from ../inst/include/Rfast.h:5,
                 from mn.h:4,
                 from Coeff.cpp:4:
../inst/include/Rfast/parallel.h:20:10: fatal error: execution: No such file or directory
 #include <execution>
          ^~~~~~~~~~~
compilation terminated.
make: *** [/usr/lib64/R/etc/Makeconf:204: Coeff.o] Error 1
ERROR: compilation failed for package ‘Rfast’
* removing ‘/usr/lib64/R/library/Rfast’
* restoring previous ‘/usr/lib64/R/library/Rfast’

The downloaded source packages are in
        ‘/tmp/RtmpzgMkSz/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Warning messages:
1: package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'ChemmineR'
2: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl,  :
  installation of package ‘Rfast’ had non-zero exit status

Desktop Information:

Any help would be appreciated.

ManosPapadakis95 commented 1 month ago

Update gcc to a newer version and it will be ok.