Runtime Error

[alapanju]

Thanks for sharing your code. It is really helpful. However, I face runtime error during execution. Please help me with the following error message RuntimeError: Error loading state dict for TransformerSrlSpan Missing keys: ['transformer.embeddings.position_ids'] Unexpected keys: []

Thanks in advance.

[Riccorl]

Can you share your python env? It may be a mismatch with the packages versions.

[Huertas97]

I've got the same problem working in a CPU Google Colab session. Here I share the Python packages from the environment:

absl-py==1.0.0
alabaster==0.7.12
albumentations==0.1.12
allennlp==2.0.1
allennlp-models==2.0.1
altair==4.2.0
appdirs==1.4.4
argon2-cffi==21.3.0
argon2-cffi-bindings==21.2.0
arviz==0.11.4
astor==0.8.1
astropy==4.3.1
astunparse==1.6.3
atari-py==0.2.9
atomicwrites==1.4.0
attrs==21.4.0
audioread==2.1.9
autograd==1.3
Babel==2.9.1
backcall==0.2.0
beautifulsoup4==4.6.3
bleach==4.1.0
blis==0.4.1
bokeh==2.3.3
boto3==1.21.1
botocore==1.24.1
Bottleneck==1.3.2
branca==0.4.2
bs4==0.0.1
CacheControl==0.12.10
cached-property==1.5.2
cachetools==4.2.4
catalogue==1.0.0
certifi==2021.10.8
cffi==1.15.0
cftime==1.5.2
chardet==3.0.4
charset-normalizer==2.0.11
click==7.1.2
cloudpickle==1.3.0
cmake==3.12.0
cmdstanpy==0.9.5
colorcet==3.0.0
colorlover==0.3.0
community==1.0.0b1
conllu==4.3
contextlib2==0.5.5
convertdate==2.4.0
coverage==3.7.1
coveralls==0.5
crcmod==1.7
cufflinks==0.17.3
cvxopt==1.2.7
cvxpy==1.0.31
cycler==0.11.0
cymem==2.0.6
Cython==0.29.27
daft==0.0.4
dask==2.12.0
datascience==0.10.6
debugpy==1.0.0
decorator==4.4.2
defusedxml==0.7.1
descartes==1.1.0
dill==0.3.4
distributed==1.25.3
dlib @ file:///dlib-19.18.0-cp37-cp37m-linux_x86_64.whl
dm-tree==0.1.6
docopt==0.6.2
docutils==0.17.1
dopamine-rl==1.0.5
earthengine-api==0.1.298
easydict==1.9
ecos==2.0.10
editdistance==0.5.3
en-core-web-sm @ https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.2.5/en_core_web_sm-2.2.5.tar.gz
entrypoints==0.4
ephem==4.1.3
et-xmlfile==1.1.0
fa2==0.3.5
fastai==1.0.61
fastdtw==0.3.4
fastprogress==1.0.0
fastrlock==0.8
fbprophet==0.7.1
feather-format==0.4.1
filelock==3.0.12
firebase-admin==4.4.0
fix-yahoo-finance==0.0.22
Flask==1.1.4
flatbuffers==2.0
folium==0.8.3
ftfy==6.1.1
future==0.16.0
gast==0.5.3
GDAL==2.2.2
gdown==4.2.1
gensim==3.6.0
geographiclib==1.52
geopy==1.17.0
gin-config==0.5.0
glob2==0.7
google==2.0.3
google-api-core==1.26.3
google-api-python-client==1.12.10
google-auth==1.35.0
google-auth-httplib2==0.0.4
google-auth-oauthlib==0.4.6
google-cloud-bigquery==1.21.0
google-cloud-bigquery-storage==1.1.0
google-cloud-core==1.0.3
google-cloud-datastore==1.8.0
google-cloud-firestore==1.7.0
google-cloud-language==1.2.0
google-cloud-storage==1.18.1
google-cloud-translate==1.5.0
google-colab @ file:///colabtools/dist/google-colab-1.0.0.tar.gz
google-pasta==0.2.0
google-resumable-media==0.4.1
googleapis-common-protos==1.54.0
googledrivedownloader==0.4
graphviz==0.10.1
greenlet==1.1.2
grpcio==1.43.0
gspread==3.4.2
gspread-dataframe==3.0.8
gym==0.17.3
h5py==3.1.0
HeapDict==1.0.1
hijri-converter==2.2.2
holidays==0.10.5.2
holoviews==1.14.7
html5lib==1.0.1
httpimport==0.5.18
httplib2==0.17.4
httplib2shim==0.0.3
humanize==0.5.1
hyperopt==0.1.2
ideep4py==2.0.0.post3
idna==2.10
imageio==2.4.1
imagesize==1.3.0
imbalanced-learn==0.8.1
imblearn==0.0
imgaug==0.2.9
importlib-metadata==4.11.0
importlib-resources==5.4.0
imutils==0.5.4
inflect==2.1.0
iniconfig==1.1.1
intel-openmp==2022.0.2
intervaltree==2.1.0
ipykernel==4.10.1
ipython==5.5.0
ipython-genutils==0.2.0
ipython-sql==0.3.9
ipywidgets==7.6.5
itsdangerous==1.1.0
jax==0.2.25
jaxlib @ https://storage.googleapis.com/jax-releases/cuda111/jaxlib-0.1.71+cuda111-cp37-none-manylinux2010_x86_64.whl
jedi==0.18.1
jieba==0.42.1
Jinja2==2.11.3
jmespath==0.10.0
joblib==1.1.0
jpeg4py==0.1.4
jsonnet==0.18.0
jsonpickle==2.1.0
jsonschema==4.3.3
jupyter==1.0.0
jupyter-client==5.3.5
jupyter-console==5.2.0
jupyter-core==4.9.1
jupyterlab-pygments==0.1.2
jupyterlab-widgets==1.0.2
kaggle==1.5.12
kapre==0.3.7
keras==2.8.0
Keras-Preprocessing==1.1.2
keras-vis==0.4.1
kiwisolver==1.3.2
korean-lunar-calendar==0.2.1
libclang==13.0.0
librosa==0.8.1
lightgbm==2.2.3
llvmlite==0.34.0
lmdb==0.99
LunarCalendar==0.0.9
lxml==4.2.6
Markdown==3.3.6
MarkupSafe==2.0.1
matplotlib==3.2.2
matplotlib-inline==0.1.3
matplotlib-venn==0.11.6
missingno==0.5.0
mistune==0.8.4
mizani==0.6.0
mkl==2019.0
mlxtend==0.14.0
more-itertools==8.12.0
moviepy==0.2.3.5
mpmath==1.2.1
msgpack==1.0.3
multiprocess==0.70.12.2
multitasking==0.0.10
murmurhash==1.0.6
music21==5.5.0
natsort==5.5.0
nbclient==0.5.10
nbconvert==5.6.1
nbformat==5.1.3
nest-asyncio==1.5.4
netCDF4==1.5.8
networkx==2.6.3
nibabel==3.0.2
nltk==3.2.5
notebook==5.3.1
numba==0.51.2
numexpr==2.8.1
numpy==1.21.5
nvidia-ml-py3==7.352.0
oauth2client==4.1.3
oauthlib==3.2.0
okgrade==0.4.3
opencv-contrib-python==4.1.2.30
opencv-python==4.1.2.30
openpyxl==3.0.9
opt-einsum==3.3.0
osqp==0.6.2.post0
overrides==3.1.0
packaging==21.3
palettable==3.3.0
pandas==1.3.5
pandas-datareader==0.9.0
pandas-gbq==0.13.3
pandas-profiling==1.4.1
pandocfilters==1.5.0
panel==0.12.1
param==1.12.0
parso==0.8.3
pathlib==1.0.1
patsy==0.5.2
pep517==0.12.0
pexpect==4.8.0
pickleshare==0.7.5
Pillow==7.1.2
pip-tools==6.2.0
plac==1.1.3
plotly==5.5.0
plotnine==0.6.0
pluggy==0.7.1
pooch==1.6.0
portpicker==1.3.9
prefetch-generator==1.0.1
preshed==3.0.6
prettytable==3.0.0
progressbar2==3.38.0
prometheus-client==0.13.1
promise==2.3
prompt-toolkit==1.0.18
protobuf==3.17.3
psutil==5.4.8
psycopg2==2.7.6.1
ptyprocess==0.7.0
py==1.11.0
py-rouge==1.1
pyarrow==6.0.1
pyasn1==0.4.8
pyasn1-modules==0.2.8
pycocotools==2.0.4
pycparser==2.21
pyct==0.4.8
pydata-google-auth==1.3.0
pydot==1.3.0
pydot-ng==2.0.0
pydotplus==2.0.2
PyDrive==1.3.1
pyemd==0.5.1
pyerfa==2.0.0.1
pyglet==1.5.0
Pygments==2.6.1
pygobject==3.26.1
pymc3==3.11.4
PyMeeus==0.5.11
pymongo==4.0.1
pymystem3==0.2.0
PyOpenGL==3.1.5
pyparsing==3.0.7
pyrsistent==0.18.1
pysndfile==1.3.8
PySocks==1.7.1
pystan==2.19.1.1
pytest==3.6.4
python-apt==0.0.0
python-chess==0.23.11
python-dateutil==2.8.2
python-louvain==0.16
python-slugify==5.0.2
python-utils==3.1.0
pytz==2018.9
pyviz-comms==2.1.0
PyWavelets==1.2.0
PyYAML==3.13
pyzmq==22.3.0
qdldl==0.1.5.post0
qtconsole==5.2.2
QtPy==2.0.1
regex==2019.12.20
requests==2.23.0
requests-oauthlib==1.3.1
resampy==0.2.2
rpy2==3.4.5
rsa==4.8
s3transfer==0.5.1
sacremoses==0.0.47
scikit-image==0.18.3
scikit-learn==1.0.2
scipy==1.4.1
screen-resolution-extra==0.0.0
scs==3.1.0
seaborn==0.11.2
semver==2.13.0
Send2Trash==1.8.0
sentencepiece==0.1.96
setuptools-git==1.2
Shapely==1.8.0
simplegeneric==0.8.1
six==1.15.0
sklearn==0.0
sklearn-pandas==1.8.0
smart-open==5.2.1
snowballstemmer==2.2.0
sortedcontainers==2.4.0
SoundFile==0.10.3.post1
spacy==2.3.7
Sphinx==1.8.6
sphinxcontrib-serializinghtml==1.1.5
sphinxcontrib-websupport==1.2.4
SQLAlchemy==1.4.31
sqlparse==0.4.2
srsly==1.0.5
statsmodels==0.10.2
sympy==1.7.1
tables==3.7.0
tabulate==0.8.9
tblib==1.7.0
tenacity==8.0.1
tensorboard==2.8.0
tensorboard-data-server==0.6.1
tensorboard-plugin-wit==1.8.1
tensorboardX==2.4.1
tensorflow @ file:///tensorflow-2.8.0-cp37-cp37m-linux_x86_64.whl
tensorflow-datasets==4.0.1
tensorflow-estimator==2.8.0
tensorflow-gcs-config==2.8.0
tensorflow-hub==0.12.0
tensorflow-io-gcs-filesystem==0.24.0
tensorflow-metadata==1.6.0
tensorflow-probability==0.15.0
termcolor==1.1.0
terminado==0.13.1
testpath==0.5.0
text-unidecode==1.3
textblob==0.15.3
Theano-PyMC==1.1.2
thinc==7.4.5
threadpoolctl==3.1.0
tifffile==2021.11.2
tokenizers==0.9.4
tomli==2.0.1
toolz==0.11.2
torch==1.7.1
torchaudio @ https://download.pytorch.org/whl/cu111/torchaudio-0.10.0%2Bcu111-cp37-cp37m-linux_x86_64.whl
torchsummary==1.5.1
torchtext==0.11.0
torchvision==0.8.2
tornado==5.1.1
tqdm==4.62.3
traitlets==5.1.1
transformer-srl==2.5
transformers==4.2.2
tweepy==3.10.0
typeguard==2.7.1
typing-extensions==3.10.0.2
tzlocal==1.5.1
uritemplate==3.0.1
urllib3==1.25.11
vega-datasets==0.9.0
wasabi==0.9.0
wcwidth==0.2.5
webencodings==0.5.1
Werkzeug==1.0.1
widgetsnbextension==3.5.2
word2number==1.1
wordcloud==1.5.0
wrapt==1.13.3
xarray==0.18.2
xgboost==0.90
xkit==0.0.0
xlrd==1.1.0
xlwt==1.3.0
zict==2.0.0
zipp==3.7.0

Additionally, during the pip install transformer-srl this error about packages compatibilities arose;

ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
torchtext 0.11.0 requires torch==1.10.0, but you have torch 1.7.1 which is incompatible.
torchaudio 0.10.0+cu111 requires torch==1.10.0, but you have torch 1.7.1 which is incompatible.
datascience 0.10.6 requires folium==0.2.1, but you have folium 0.8.3 which is incompatible.

[Riccorl]

In this case, the problem is a mismatch between the transformer-srl version you installed with the one compatible with my pre-trained weights.

You can solve by installing transformer-srl 2.4.6:

pip install --upgrade transformer-srl==2.4.6

I should probably clarify it better in the README, sorry about that.

[Huertas97]

Now it works fine. Thank you!

In this case, the problem is a mismatch between the transformer-srl version you installed with the one compatible with my pre-trained weights.

You can solve by installing transformer-srl 2.4.6:

pip install --upgrade transformer-srl==2.4.6

I should probably clarify it better in the README, sorry about that.