Get SILVA reference files - Githubissues

RichStack / Stack_SemenMicrobiome_2022

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Get SILVA reference files #2

Closed RichStack closed 2 years ago

RichStack commented 2 years ago

Need SILVA reference alignment to align our sequences from the rrnDB so that we can make sure we're looking at consistent region within the gene. We can get this from mothur wiki. We would like the recreated SEED database from Release 138 .1:

https://mothur.s3.us-east-2.amazonaws.com/wiki/silva.seed_v138_1.tgz

Put this in data/references/