eQTpLot cannot be installed due to LDheatmap dependency

RitchieLab / eQTpLot

Visualization of Colocalization Between eQTL and GWAS Data

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eQTpLot cannot be installed due to LDheatmap dependency #22

Closed Zixuan-YU closed 5 months ago

Zixuan-YU commented 5 months ago

Dear development team,

eQTpLot cannot be installed due to the LDheatmap dependency. I saw that 'package LDheatmap has been removed from the CRAN repository'. [https://cran.r-project.org/web/packages/LDheatmap/index.html] I tried to install previously available versions that can be obtained from the archive, but the installation process has errors so I cannot continue. My version of R is 4.3.0. Would you suggest another way to install the eQTpLot package?

Regards, Zixuan

TGDrivas commented 5 months ago

Hello,

You should be able to install packages built for older versions of R using a command like:

install_github("SFUStatgen/LDheatmap")

Please let me know if this works.

Zixuan-YU commented 5 months ago

Dear development team, This is working! Thanks for the clarification.