Riverscapes / pyBRAT

pyBRAT - Beaver Restoration Assessment Tool (Python)
http://brat.riverscapes.xyz
GNU General Public License v3.0
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Taking Connor's Data and Building Data Capture Event & Pretty Maps #138

Closed joewheaton closed 5 years ago

joewheaton commented 6 years ago

So in testing our new functionality in BRAT for data capture, we want some good local examples. Connor Penrod's thesis (Connor will add links to data and figures) looked at Beaver Dam Dynamics in Logan River Watershed. He specifically did desktop data capture events of dams through time:

My Request

Connor please share the data with @chadFHC and @CHafen

Figures

As Connor is out of time and has no funding, @CHafen can you please work with Connor to help him prepare new figures 2, 5- 8 (maybe split out 5 too). For us, I want you to work on how we display this sort of data we're now getting from our Survey123 apps cartographically. Make some versions of things and run them by me (here) and then we'll arrive at something we'll rope into BRAT Layer Packages and our Atlas standards.

Apply our lab cartographic standards and reproduce these. Connor, if you want to learn how to do this, Chalese can help you, but I don't expect you to do the work at this stage. I'm going to have her update the figures and provide them to you.

fig 5 connor fig7connor

Data Capture Events

@chadFHC I'd like you to get all the GIS data together from Connor, organize it on Box and ingest these into a BRAT project (enlist help from @banderson1618 if you need it). The challenge here is to grab the most recent Logan BRAT (talk to @MattReimer on #102) and then figure out how to convert the existing shapefiles from Connor into a riverscapes pyBRAT compliant data capture event. This is something we need to figure out anyway as many of our TNC and Idaho project partners will be giving us data. So lets figure it out now.

@CHafen you can make maps summarizing these data, and @bangen, @wally-mac and I can help come up with ways to display it.

StoryMap

Once we get done with this, @chadFHC I'd like you to help Connor make a short web page on his project, highlighting what he did, and make a nice little StoryMap to walk through things.


Clear as mud?

joewheaton commented 6 years ago

@CHafen and @chadFHC you can bill your time on this to TNC BRAT

chadFHC commented 6 years ago

Okay

CHafen commented 6 years ago

Sounds good. I can work on these as soon as the data is ready. Also, it would be helpful to have the .mxd files, especially for the zoom ins in figures 6 and 7.

PenrodC commented 6 years ago

Here is the data used to make the figures ABDD_data.xlsx

CHafen commented 6 years ago

What's the status on getting shapefiles and .mxd files organized and on Box for this project @chadFHC and @PenrodC ?

chadFHC commented 6 years ago

@CHafen I haven't seen any shapefiles or .mxd files yet to upload on Box. I'll keep my eye out for them.

PenrodC commented 6 years ago

Apologies for missing that request earlier. Everything is on box in this link https://app.box.com/folder/45862501491

I can pull out the exact mxd's since the file is a bit of a mess later today.

PenrodC commented 6 years ago

Rather, this link

https://app.box.com/folder/45862501491

PenrodC commented 6 years ago

If you copy and paste the link works, clicking on it doesn't for some reason.

chadFHC commented 6 years ago

Thanks @PenrodC, that would be great.

CHafen commented 6 years ago

Thanks @PenrodC

PenrodC commented 6 years ago

Well, unfortunately I wasn't able to find the zoomed in mxd's. I lost a thumb drive when moving to Moscow, and it's bitten me a couple times now. Fortunately the locations I zoomed in on were chosen because they were locations that had multiple different "status changes" in one easily seen location. They were integral to the greater narrative, just a higher resolution illustration of the figure at large.

PenrodC commented 6 years ago

The rest of the mxd's should all be under maps.

CHafen commented 6 years ago

Hey @PenrodC is there a shapefile for 2017 dams? I didn't see it with the files for the other years.

PenrodC commented 6 years ago

No, I wasn't sure if one should be created for 2017 as it wasn't within the original scope of the study. @CHafen it sounds like Joe does wants it included, however.

CHafen commented 6 years ago

Thanks @PenrodC, is there data for 2017 dam locations and such just not compiled into one shapefile? If so, is compiling that data something you want @chadFHC to work on @joewheaton ?

PenrodC commented 6 years ago

Here it is @CHafen https://app.box.com/folder/45862453494 Listed under 2017_dams. In the attribute table under column "2017" are the values 1-3. 1 = intact, 2 = breached, 3 = blown out.

CHafen commented 6 years ago

Thanks @PenrodC

CHafen commented 6 years ago

Draft figures 2 and 5. What do you think @joewheaton ? logan_littlebear_studyarea logan_2009-2017_damstatus

wally-mac commented 6 years ago

These are awesome maps! Nice work Chalese! @Albonicomt, I think this is a good template for the Escante maps you are working on.

Albonicomt commented 6 years ago

Nice! I will definitely keep these in mind when I put some of those maps together. Thanks!

PenrodC commented 6 years ago

I think they work fantastically. Thank you Chalese, they are much more effective than my originals!

CHafen commented 6 years ago

Thanks @wally-mac @Albonicomt if you have any questions on how I made these let me know @PenrodC I'm having some trouble figuring out what shapefile to use for figure 7 (2014 dams comparing NAIP and Google imagery) could you point me to the correct shapefile for that?

PenrodC commented 6 years ago

@CHafen I'll be back home in a couple days, I'll try to track it down for you then.

PenrodC commented 6 years ago

Here you go @CHafen

https://app.box.com/folder/45862478876 Shapefile is 2014_NAIP_Google_comp.

Again, thank you for the amazing work you've put in to these figures.

PenrodC commented 6 years ago

Just in case the link doesn't work again, it is under Mapped_Beaver_Dams -> Status_Change_Analysis.

CHafen commented 6 years ago

Thanks @PenrodC . Also, I'm not sure what data to use for the 2016 comparison. I thought it would be the 2016_dam_figure shapefile in the same folder, but it looks like that file doesn't have all the watersheds.

PenrodC commented 6 years ago

If you go to Maps @CHafen -> it's NAIP_Field_Comparison

CHafen commented 6 years ago

Thanks @PenrodC I found the map. I can't find the shapefiles for "NAIP" and "Field" though.

CHafen commented 6 years ago

I've posted completed figures to Box here

PenrodC commented 6 years ago

Apologies @CHafen , I named them generally for the map but they retained their individual names within the files. NAIP is 2016_Dams_point found under the header Mapped Dams. Each of the "field" shape files will be found under the "konrad" header (as he collected the data). Rock_creek_field, Temple_field, and East_Fork_Little_bear_field.

CHafen commented 6 years ago

Hey @PenrodC . I found the data and everything looks good, except the field data for Rock Creek. What I found doesn't match your figure (see attached image- yellow being NAIP, green being field). The shapefile I found for dams surveyed in the field has way more dams than are shown in the figure you made. Not sure why this one doesn't seem to match and Temple Fork and East Fork Little Bear look like they match. I got them all from the same folder (Mapped_Beaver_Dams--> Konrad). Any thoughts as to why this might be off? capture

PenrodC commented 6 years ago

@CHafen it's an artifact of an earlier version. The data you worked off of should be more accurate for the current narrative.

CHafen commented 5 years ago

So Konrad was looking at this figure (figure 8) and was wondering where @PenrodC got the data. He says they didn't collect any field data for East Fork Little Bear and that it looks like all the dams that we're calling "field" in this figure are from Google Earth imagery. He sent me a shapefile for the dams they surveyed in the field for the Logan-Little Bear HUC 8. It shows dams in Rock Creek and Temple Fork, but not in the East Fork Little Bear.

PenrodC commented 5 years ago

I pulled them all off of the iPad in the lab. Are the dams for Rock Creek and Temple the same as in the folder?

CHafen commented 5 years ago

No, there are more dams for both Temple and Rock Creek in the file Konrad sent me than in the folder I got from you.

PenrodC commented 5 years ago

Well I still think we should keep three sub basins for the comparison. Does Konrad remember what other sites were surveyed in the field in addition to Temple and Rock? I was under the erroneous impression that everything in that file was collected in the field. How many dams short are Temple and Rock? The "artifact" I mentioned earlier was when I initially was looking for false positives and negatives I was only interested in dams that were visible in the imagery, but were misclassified; ignoring dams not visible due to low resolution/occlusions/etc. I later decided that methodology construed the data in to a more favorable light than in reality. My best guess is that I sent you the "old" data.

CHafen commented 5 years ago

The data I got from Konrad is on Box here. All the dams in this file were collected in the field. There are several other watersheds. Below is a picture of the difference in # of dams from the data I got from you (in green) and from the data I got from Konrad (black) capture

PenrodC commented 5 years ago

@CHafen, here is the data for figure 8. I decided a third sub-watershed actually was not necessary. In the original I have a built in table, but I'm going to include some extra variables and I feel it would be too busy to keep alongside everything else. I appreciate all of the help you've given. I know you're busy, so whenever you have a little bit of extra time is fine. NAIP_Field_comparison.zip