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Robaina
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Phycogem
Modeling phycospheric metabolic interactions in python
Apache License 2.0
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Survey MAGs for enzyme representation before reconstruction?
#14
Robaina
opened
11 months ago
0
Expand universal databases
#13
Robaina
opened
1 year ago
0
Test alternative, open-source MIP solvers in SMETANA
#12
Robaina
opened
1 year ago
0
Implement logger
#11
Robaina
opened
1 year ago
0
Update SMETANA to find minimal clusters?
#10
Robaina
opened
1 year ago
0
Remove duplicated reactions by met set after taxon-specific reconstruction
#9
Robaina
opened
1 year ago
0
Build minimal POC
#8
Robaina
opened
1 year ago
0
Elaborate docs and jupyter notebooks
#7
Robaina
closed
1 year ago
0
Add exchanges for major vitamins and cofactors when synthetic pathways exist in taxon-specific model
#6
Robaina
opened
1 year ago
0
Check for futile energy cycles on taxa-specific reconstructions
#5
Robaina
closed
1 year ago
1
Create updated universal models for bacteria, archaea, grampos, gramneg, and cyanobacteria
#4
Robaina
opened
1 year ago
0
Check CarveME's universal model curation pipeline
#3
Robaina
closed
1 year ago
0
No chemical formulas in universal prokaryote model
#2
Robaina
closed
1 year ago
1
Group functions into a Model class
#1
Robaina
closed
1 year ago
0