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RobertsLab / project-oyster-oa

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c. gigas transcriptome for PECAN? #4

Closed yaaminiv closed 7 years ago

yaaminiv commented 7 years ago

@sr320 ?

sr320 commented 7 years ago

Transcriptome or Proteome?

sr320 commented 7 years ago

Proteome: http://owl.fish.washington.edu/halfshell/bu-git-repos/nb-2017/C_gigas/data/Cg_Gigaton_proteins.fa

Proteome with possible contaminants: http://owl.fish.washington.edu/halfshell/bu-git-repos/nb-2017/C_gigas/data/Cg_Giga_cont_AA.fa

yaaminiv commented 7 years ago

oh sorry, proteome! would it be better to use the one with or without contaminants (i'm assuming the one without...?)